RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	NPIPB8	E9PQR5	432 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	PLOD2	O00469	737 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	OR7A17	O14581	309 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CD5L	O43866	347 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	SUPT3H	O75486	399 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	RCBTB2	O95199	551 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	PSMG1	O95456	288 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	TGM6	O95932	706 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	ACTL6A	O96019	429 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	FGF2	P09038	288 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	SLC35E2	P0CK97	266 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	NEFH	P12036	1026 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CPM	P14384	443 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	PAX1	P15863	534 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	TCP1	P17987	556 aa	Known RBP	3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	TNNI3	P19429	210 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CRYGS	P22914	178 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	EEF1B2	P24534	225 aa	Known RBP	3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	MAGEA12	P43365	314 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	RASSF2	P50749	326 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	ZNF81	P51508	661 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	RAP1GDS1	P52306	607 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	GAS1	P54826	345 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	UCP2	P55851	309 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CLDN15	P56746	228 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	EGR4	Q05215	589 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	PLCXD2	Q0VAA5	305 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CUL3	Q13618	768 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	HNF4G	Q14541	408 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	EXOSC7	Q15024	291 aa	Known RBP	3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	IQCC	Q4KMZ1	466 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	TECRL	Q5HYJ1	363 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	LCE4A	Q5TA78	99 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	GRTP1	Q5TC63	336 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	NPSR1	Q6W5P4	371 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	COMMD6	Q7Z4G1	85 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	GOLGA7	Q7Z5G4	137 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	LUZP2	Q86TE4	346 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	YRDC	Q86U90	279 aa	Known RBP	3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	FADS6	Q8N9I5	356 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	WDSUB1	Q8N9V3	476 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	L3MBTL4	Q8NA19	623 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	OR52B6	Q8NGF0	335 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	B4GALNT2	Q8NHY0	566 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	ZPLD1	Q8TCW7	415 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	KCTD4	Q8WVF5	259 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	DPF1	Q92782	380 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	TANK	Q92844	425 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	ABTB1	Q969K4	478 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	UBE2E3	Q969T4	207 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	OMA1	Q96E52	524 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CNRIP1	Q96F85	164 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	BSCL2	Q96G97	398 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	KRT12	Q99456	494 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	SEPHS2	Q99611	448 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CCL19	Q99731	98 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	ZNF747	Q9BV97	191 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	METTL7A	Q9H8H3	244 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CALHM2	Q9HA72	323 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CD274	Q9NZQ7	290 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	ARMCX1	Q9P291	453 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	OPTC	Q9UBM4	332 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	CES1P1	Q9UKY3	287 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	DLGAP4	Q9Y2H0	992 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	ALPK2	Q86TB3	2170 aa		3.73	□□□□□ -1.81
VPS52-222	ENST00000495981	TENM3	Q9P273	2699 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	DSCAM	O60469	2012 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	HEATR5A	Q86XA9	2040 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	DNAH9	Q9NYC9	4486 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981		A0A096LNT2	108 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	IQANK1	A0A1B0GTG1	560 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	C2orf92	A0A1B0GVN3	265 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	MAGEA13P	A6NCF6	341 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	GAGE12J	A6NER3	117 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	FRG2C	A6NGY1	282 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	OR6C70	A6NIJ9	312 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981		H0YC42	278 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	FOXE1	O00358	373 aa	Predicted RBP	3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	TP53I11	O14683	189 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	ACOX3	O15254	700 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	EIF3H	O15372	352 aa	Known RBP eCLIP	3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	TXNL1	O43396	289 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	TSPAN2	O60636	221 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	TRAPPC6A	O75865	159 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	CGA	P01215	116 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	RPS17	P08708	135 aa	Known RBP	3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	CT45A8	P0DMV1	189 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	CT45A9	P0DMV2	189 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	CCNA2	P20248	432 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	NT5E	P21589	574 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	LMO1	P25800	156 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	SRD5A2	P31213	254 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	SOAT1	P35610	550 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	UGT2B10	P36537	528 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	EMD	P50402	254 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	TPD52	P55327	224 aa	Predicted RBP	3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	MRPS25	P82663	173 aa	Known RBP	3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	HMGCS1	Q01581	520 aa		3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	ILF2	Q12905	390 aa	Known RBP	3.72	□□□□□ -1.81
VPS52-222	ENST00000495981	SNTA1	Q13424	505 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms