RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ATP23Q9Y6H3 246 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 V9GYQ6 96 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 CR1P17927 2039 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
ATG4B-224ENST00000494132 IGHV1-18A0A0C4DH31 117 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 TRIM64A6NGJ6 449 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 TRIM64BA6NI03 449 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 RPL36A-HNRNPH2H7BZ11 118 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 FFAR1O14842 300 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 ARHGEF9O43307 516 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 NDUFS7O75251 213 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 OR7A10O76100 309 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 IFNW1P05000 195 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 B4GALT1P15291 398 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 AQP2P41181 271 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 RBM34P42696 430 aaKnown RBP12.82□□□□□ -0.36
ATG4B-224ENST00000494132 CSNK1A1P48729 337 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 ST3GAL3Q11203 375 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 SHEQ5VZ18 495 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 GLYATQ6IB77 296 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 FAM86B1Q8N7N1 296 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 ANKK1Q8NFD2 765 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 MOSPD2Q8NHP6 518 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 GEMIN6Q8WXD5 167 aaKnown RBP12.82□□□□□ -0.36
ATG4B-224ENST00000494132 HTRA1Q92743 480 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 LRRC37BQ96QE4 947 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 SMR3AQ99954 134 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 FNDC11Q9BVV2 318 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 GSX2Q9BZM3 304 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 ULBP2Q9BZM5 246 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 POLR2J2Q9GZM3 115 aaKnown RBP12.82□□□□□ -0.36
ATG4B-224ENST00000494132 POLR2J3Q9H1A7 115 aaKnown RBP12.82□□□□□ -0.36
ATG4B-224ENST00000494132 MAN2C1Q9NTJ4 1040 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 TAGLN3Q9UI15 199 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 MGAT4BQ9UQ53 548 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 MED31Q9Y3C7 131 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 RTTNQ86VV8 2226 aa12.82□□□□□ -0.36
ATG4B-224ENST00000494132 ZNF99A8MXY4 864 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-224ENST00000494132 CD8AP01732 235 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 IFI30P13284 250 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 IDH3GP51553 393 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-224ENST00000494132 SH3BGRP55822 239 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-224ENST00000494132 MYBPC1Q00872 1141 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 ZP4Q12836 540 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 NPRL3Q12980 569 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 TSEN54Q7Z6J9 526 aaKnown RBP12.81□□□□□ -0.36
ATG4B-224ENST00000494132 NRMQ8IXM6 262 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 OFCC1Q8IZS5 231 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 CIARTQ8N365 385 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-224ENST00000494132 SLC38A2Q96QD8 506 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 CCT8L2Q96SF2 557 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 TRAF4Q9BUZ4 470 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-224ENST00000494132 NOX3Q9HBY0 568 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 B3GAT2Q9NPZ5 323 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 DLL4Q9NR61 685 aa12.81□□□□□ -0.36
ATG4B-224ENST00000494132 GDF2Q9UK05 429 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-224ENST00000494132 ARPC4-TTLL3A0A0A6YYG9 625 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 NDUFAB1O14561 156 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 SMAD7O15105 426 aaKnown RBP12.8□□□□□ -0.36
ATG4B-224ENST00000494132 DCTN3O75935 186 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 DIRAS1O95057 198 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 HLA-HP01893 362 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 CECR9P0C854 216 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 THRBP10828 461 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 MAKP20794 623 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 TTKP33981 857 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 FABP6P51161 128 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 MXRA7P84157 204 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 RUNX1T1Q06455 604 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 LAPTM4AQ15012 233 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 TBPL2Q6SJ96 375 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 ZNF813Q6ZN06 617 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 Q71RC1 249 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-224ENST00000494132 MDP1Q86V88 176 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 IGFN1Q86VF2 1251 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 DEPDC4Q8N2C3 294 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 TMEM54Q969K7 222 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 BOD1Q96IK1 185 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 HS6ST2Q96MM7 605 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 DHRS9Q9BPW9 319 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 OBP2BQ9NPH6 170 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 ZNF701Q9NV72 531 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-224ENST00000494132 POFUT2Q9Y2G5 429 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 MTORP42345 2549 aa12.8□□□□□ -0.36
ATG4B-224ENST00000494132 MCIDASD6RGH6 385 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 H7C1Q1 480 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 hCG_2039718K7EN88 272 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 OVOL3O00110 214 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 PRSS23O95084 383 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 BCL10O95999 233 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 CALCRP30988 508 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 IFNA8P32881 189 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 NAAAQ02083 359 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 PIGFQ07326 219 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 TOP3AQ13472 1001 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-224ENST00000494132 TRAM2Q15035 370 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 VHLLQ6RSH7 139 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 DTX2Q86UW9 622 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 DEFB107AQ8IZN7 70 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 PGAM4Q8N0Y7 254 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms