RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 EDNRAP25101 427 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 AZGP1P25311 298 aaKnown RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 ACVR1BP36896 505 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 PSMB10P40306 273 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 RPS18P62269 152 aaKnown RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 PPP3R1P63098 170 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 PUDPQ08623 228 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 MFSD13AQ14CX5 517 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 OR7A5Q15622 319 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 INPP5JQ15735 1006 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 DCAF12Q5T6F0 453 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 DDI2Q5TDH0 399 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 PRAMEF20Q5VT98 475 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 TIPARPQ7Z3E1 657 aaKnown RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 OR6V1Q8N148 313 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 ARMC10Q8N2F6 343 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 OR6N2Q8NGY6 317 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 SNX33Q8WV41 574 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 ASB10Q8WXI3 467 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 RGP1Q92546 391 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 ABTB1Q969K4 478 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 RELTQ969Z4 430 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 NTNG2Q96CW9 530 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 INTS14Q96SY0 518 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 EDEM2Q9BV94 578 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 DDA1Q9BW61 102 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 STRADBQ9C0K7 418 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 PPIL3Q9H2H8 161 aaKnown RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF160Q9HCG1 818 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 SH2D2AQ9NP31 389 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 CHST11Q9NPF2 352 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 SDHAF3Q9NRP4 125 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 FBXL2Q9UKC9 423 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 NCKAP5O14513 1909 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 LAMA1P25391 3075 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 WDFY4Q6ZS81 3184 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 PRSS37A4D1T9 235 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 LIPT2A6NK58 231 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 XKRYO14609 159 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 SNPHO15079 494 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 SNX4O95219 450 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 GPANK1O95872 356 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 CTLA4P16410 223 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 CFL1P23528 166 aaKnown RBP9.58□□□□□ -0.88
CLCN6-208ENST00000494028 HOXD11P31277 338 aaPredicted RBP9.58□□□□□ -0.88
CLCN6-208ENST00000494028 NUBP1P53384 320 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 RPS11P62280 158 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLCN6-208ENST00000494028 C19orf57Q0VDD7 668 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 ZP4Q12836 540 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 SELENBP1Q13228 472 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 GLYR1Q49A26 553 aaPredicted RBP9.58□□□□□ -0.88
CLCN6-208ENST00000494028 CCDC157Q569K6 752 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 ZMAT1Q5H9K5 638 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 HBMQ6B0K9 141 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 C3orf33Q6P1S2 294 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 RPL22L1Q6P5R6 122 aaKnown RBP9.58□□□□□ -0.88
CLCN6-208ENST00000494028 OPN5Q6U736 354 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 TRILQ7L0X0 811 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 RAB11FIP2Q7L804 512 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 FAM220AQ7Z4H9 259 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 SLC22A16Q86VW1 577 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 WDFY1Q8IWB7 410 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 WDSUB1Q8N9V3 476 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 ADPRHL1Q8NDY3 354 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 OR4K17Q8NGC6 315 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 HSD17B8Q92506 261 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 GHSRQ92847 366 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 KIAA1143Q96AT1 154 aaPredicted RBP9.58□□□□□ -0.88
CLCN6-208ENST00000494028 DDIT4LQ96D03 193 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 KLHL15Q96M94 604 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 FRMD6Q96NE9 622 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 MNTQ99583 582 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 POTEKPQ9BYX7 375 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 WDR76Q9H967 626 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 FANCFQ9NPI8 374 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 KLHL13Q9P2N7 655 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 MRM2Q9UI43 246 aaKnown RBP9.58□□□□□ -0.88
CLCN6-208ENST00000494028 UGT2A1Q9Y4X1 527 aa9.58□□□□□ -0.88
CLCN6-208ENST00000494028 SLC22A23A1A5C7 686 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 HSPB2A8KAH6 182 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 C9orf172C9J069 976 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 FAM47E-STBD1D6RA91 191 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 H3BML4 177 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 MASP2O00187 686 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 PSMD9O00233 223 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 TP53I11O14683 189 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 EFNA2O43921 213 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 GPRIN2O60269 458 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 HPGDSO60760 199 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 TRIM3O75382 744 aaPredicted RBP9.57□□□□□ -0.88
CLCN6-208ENST00000494028 UPK3AO75631 287 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 OR6A2O95222 327 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 PTTG1O95997 202 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 WNT11O96014 354 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 UCHL1P09936 223 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 RAB40ALP0C0E4 278 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 CCL3P10147 92 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 TFPIP10646 304 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 HLA-DOBP13765 273 aa9.57□□□□□ -0.88
CLCN6-208ENST00000494028 TCEA1P23193 301 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms