RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 BEX1Q9HBH7 125 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 NUDT15Q9NV35 164 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 ADAM30Q9UKF2 790 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 PI4KAP42356 2102 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 CPED1A4D0V7 1026 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 TO15178 435 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 TOX3O15405 576 aaPredicted RBP12.52□□□□□ -0.41
VCP-207ENST00000493886 TSPAN2O60636 221 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 CD3GP09693 182 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 ERVK-25P63136 954 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 ZNF117Q03924 483 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 PLCXD2Q0VAA5 305 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 TOR2AQ5JU69 321 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 GUSBP11Q6P575 273 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 SHISA6Q6ZSJ9 500 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 COX15Q7KZN9 410 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 TRILQ7L0X0 811 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 SSX6Q7RTT6 188 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 KANSL1Q7Z3B3 1105 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 TCTE3Q8IZS6 198 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 NPEPL1Q8NDH3 523 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 DUSP18Q8NEJ0 188 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 ZFP3Q96NJ6 502 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 GPX7Q96SL4 187 aaPredicted RBP12.52□□□□□ -0.41
VCP-207ENST00000493886 NMNAT3Q96T66 252 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 KCNJ15Q99712 375 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 THAP7Q9BT49 309 aaPredicted RBP12.52□□□□□ -0.41
VCP-207ENST00000493886 SLC22A11Q9NSA0 550 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 SRPK3Q9UPE1 567 aa12.52□□□□□ -0.41
VCP-207ENST00000493886 TEX51A0A1B0GUA7 166 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 BLOC1S5-TXNDC5H3BN57 136 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 ARHGEF9O43307 516 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 PYCR1P32322 319 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 RPL35P42766 123 aaKnown RBP12.51□□□□□ -0.41
VCP-207ENST00000493886 FOXL2P58012 376 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 EGR4Q05215 589 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 FCN2Q15485 313 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 ISXQ2M1V0 245 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 RHBDD2Q6NTF9 364 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 SFXN4Q6P4A7 337 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 LIPHQ8WWY8 451 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 RFT1Q96AA3 541 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 RASD2Q96D21 266 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 GUCD1Q96NT3 240 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 ABHD1Q96SE0 405 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 CNN2Q99439 309 aaKnown RBP12.51□□□□□ -0.41
VCP-207ENST00000493886 DDOQ99489 341 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 MARVELD1Q9BSK0 173 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 NANSQ9NR45 359 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 HCRTR2O43614 444 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 PLPP2O43688 288 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 TFP02787 698 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 PNLIPP16233 465 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 TACR3P29371 465 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 AQP2P41181 271 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 SLC6A8P48029 635 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 TAS2R43P59537 309 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 LGALS3BPQ08380 585 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 GGTLC2Q14390 218 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 NR0B2Q15466 257 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 HBMQ6B0K9 141 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 MARCH3Q86UD3 253 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 IZUMO1Q8IYV9 350 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 POMGNT2Q8NAT1 580 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 GALNT11Q8NCW6 608 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 OR5J2Q8NH18 312 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 TRMT10AQ8TBZ6 339 aaKnown RBP12.51□□□□□ -0.41
VCP-207ENST00000493886 ORAI1Q96D31 301 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
VCP-207ENST00000493886 MMP25Q9NPA2 562 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 HIF3AQ9Y2N7 669 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 WDR87Q6ZQQ6 2873 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 A0A0A6YYJ9 748 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 A0A1B0GTQ1 180 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 OR6C68A6NDL8 312 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 IMPA2O14732 288 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 GMFGO60234 142 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 NAA10P41227 235 aaPredicted RBP12.51□□□□□ -0.41
VCP-207ENST00000493886 PON3Q15166 354 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 LAMTOR1Q6IAA8 161 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 OR4D9Q8NGE8 314 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 STT3BQ8TCJ2 826 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 ZPLD1Q8TCW7 415 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 TTC9Q92623 222 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 ZC3HAV1LQ96H79 300 aaKnown RBP12.51□□□□□ -0.41
VCP-207ENST00000493886 ADAM19Q9H013 955 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 FSCN3Q9NQT6 498 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 ZNF222Q9UK12 451 aa12.51□□□□□ -0.41
VCP-207ENST00000493886 CCDC163A0A0D9SF12 145 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 LY6G6EA0A0G2JKS1 128 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 OR6C76A6NM76 312 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 ALG1L2C9J202 215 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 C1QBP02746 253 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 F8A1P23610 371 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 ABCD3P28288 659 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 DIO1P49895 249 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 MAB21L1Q13394 359 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 TP53I3Q53FA7 332 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 PMS2CLQ68D20 193 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms