RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 FBXO45P0C2W1 286 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 SLC25A4P12235 298 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 CSNK2A2P19784 350 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 SLC8B1Q6J4K2 584 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 FIGNL1Q6PIW4 674 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 FAM111BQ6SJ93 734 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 TMPRSS11FQ6ZWK6 438 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 GAREM2Q75VX8 874 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 RHOUQ7L0Q8 258 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 RANBP3LQ86VV4 465 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF614Q8N883 585 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 VN1R2Q8NFZ6 395 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 MRPL38Q96DV4 380 aaKnown RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 HSPA12BQ96MM6 686 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 MTHFD2LQ9H903 347 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 RNF122Q9H9V4 155 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 SHPKQ9UHJ6 478 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF346Q9UL40 294 aaKnown RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 MED31Q9Y3C7 131 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 YIPF1Q9Y548 306 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 ALPK2Q86TB3 2170 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 GXYLT2A0PJZ3 443 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 WRBO00258 174 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 AGPAT2O15120 278 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 CTAG2O75638 210 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 GALTP07902 379 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 FOLR2P14207 255 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ST6GAL1P15907 406 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ADH6P28332 368 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 AVPR2P30518 371 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PRSS3P35030 304 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 GPX4P36969 197 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PSMD4P55036 377 aaKnown RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 SGCAQ16586 387 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 SCGB2B2Q4G0G5 96 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ATPAF1Q5TC12 328 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 TMCO2Q7Z6W1 182 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 GABRG1Q8N1C3 465 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 GALNT16Q8N428 558 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 WDSUB1Q8N9V3 476 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 STOML3Q8TAV4 291 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ASB13Q8WXK3 278 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PHYHIPQ92561 330 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 FGF13Q92913 245 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 HIST1H2BAQ96A08 127 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF764Q96H86 408 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ACTRT3Q9BYD9 372 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PRSS16Q9NQE7 514 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 SLC25A13Q9UJS0 675 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 FARSAQ9Y285 508 aaKnown RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ADAM18Q9Y3Q7 739 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ETV7Q9Y603 341 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 A0A0A6YYC8 382 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 WASH3PC4AMC7 463 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 I3L1I5 382 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 AMY2AP04746 511 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 LAMP2P13473 410 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF14P17017 642 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 CPT2P23786 658 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PRKXP51817 358 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PON3Q15166 354 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 RNF212Q495C1 297 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 VWA2Q5GFL6 755 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 RNF113BQ8IZP6 322 aaKnown RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 RNF141Q8WVD5 230 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 TFGQ92734 400 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ISOC2Q96AB3 205 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 MOAP1Q96BY2 351 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PIK3IP1Q96FE7 263 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 RHOFQ9HBH0 211 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 TMEM27Q9HBJ8 222 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 SMCO4Q9NRQ5 59 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 FBXO34Q9NWN3 711 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 FRMPD3Q5JV73 1810 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ARID1AO14497 2285 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 EEF1E1-BLOC1S5C9J1V9 151 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ALOX12BO75342 701 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 LYPD3O95274 346 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 RAB3DO95716 219 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 AK4P27144 223 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ACTR1AP61163 376 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 EEF1A1P68104 462 aaKnown RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PJVKQ0ZLH3 352 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 AIMP2Q13155 320 aaKnown RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 MRPL2Q5T653 305 aaKnown RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PRAMEF17Q5VTA0 474 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 OR52W1Q6IF63 320 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 RPL13AP3Q6NVV1 102 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 SAMD14Q8IZD0 417 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ACOT4Q8N9L9 421 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ZBTB8AQ96BR9 441 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 NMNAT3Q96T66 252 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ZMAT3Q9HA38 289 aaKnown RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 MMP26Q9NRE1 261 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 LSM7Q9UK45 103 aaKnown RBP10.67□□□□□ -0.7
HDAC4-210ENST00000493582 ICAM5Q9UMF0 924 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 SLC45A1Q9Y2W3 748 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 PCDHGA1Q9Y5H4 931 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 IER3IP1Q9Y5U9 82 aa10.67□□□□□ -0.7
HDAC4-210ENST00000493582 A0A1B0GTQ1 180 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms