RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 OR8K3Q8NH51 312 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 MGARPQ8TDB4 240 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 PIK3R3Q92569 461 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 DAZLQ92904 295 aaKnown RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TMBIM1Q969X1 311 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 EFHD2Q96C19 240 aaPredicted RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 OMA1Q96E52 524 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 C14orf79Q96F83 325 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 ELMOD3Q96FG2 381 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 C16orf58Q96GQ5 468 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 AMDHD1Q96NU7 426 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 BTBD9Q96Q07 612 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 LIME1Q9H400 295 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 PLK3Q9H4B4 646 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 LRTM1Q9HBL6 345 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 MCCC2Q9HCC0 563 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 SLC35C2Q9NQQ7 365 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 HPF1Q9NWY4 346 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 KCNG2Q9UJ96 466 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 SNX6Q9UNH7 406 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 MRPS33Q9Y291 106 aaKnown RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 YARS2Q9Y2Z4 477 aaKnown RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 SLC6A5Q9Y345 797 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 CLCA3PQ9Y6N3 262 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 SETD2Q9BYW2 2564 aaPredicted RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TACC2O95359 2948 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 ANKHD1Q8IWZ3 2542 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 NAV3Q8IVL0 2385 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 GNG14A0A1W2PPG7 69 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 FRG2CA6NGY1 282 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TFECO14948 347 aaPredicted RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 SCAMP2O15127 329 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TO15178 435 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 OR10H2O60403 315 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 DOK2O60496 412 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TBX19O60806 448 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TMCC2O75069 709 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 PEX11AO75192 247 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 SERPINE1P05121 402 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 UQCRHP07919 91 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 FGF4P08620 206 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 ICAM2P13598 275 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CD99P14209 185 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 ITGA2P17301 1181 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 GABRB1P18505 474 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TNNI3P19429 210 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 ZNF10P21506 573 aaPredicted RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 PIK3R1P27986 724 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 SHC1P29353 583 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CASP3P42574 277 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CDKN2CP42773 168 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 FUT6P51993 359 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 NCBP2P52298 156 aaKnown RBP eCLIP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 IST1P53990 364 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CASP9P55211 416 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 NUP107P57740 925 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 MAGOHP61326 146 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 PPIAP62937 165 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TRA2BP62995 288 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 SKP1P63208 163 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 PHEXP78562 749 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 C2orf80Q0P641 193 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 SNTB1Q13884 538 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CASP8Q14790 479 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 DUSP5Q16690 384 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 HYAL4Q2M3T9 481 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 KRTCAP3Q53RY4 240 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 SPIN4Q56A73 249 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 C6orf136Q5SQH8 315 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CCNJQ5T5M9 372 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 NSUN5P2Q63ZY6 315 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CGB2Q6NT52 195 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 MEX3BQ6ZN04 569 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CFAP77Q6ZQR2 320 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 HMGN2P46Q86SG4 172 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 COMTD1Q86VU5 262 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CCDC71Q8IV32 467 aaPredicted RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 OR2L13Q8N349 312 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TMEM156Q8N614 296 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 GBP7Q8N8V2 638 aaPredicted RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CCDC63Q8NA47 563 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 TMEM178AQ8NBL3 297 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 OR5M1Q8NGP8 315 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 OR9I1Q8NGQ6 314 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 BBS10Q8TAM1 723 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 FAM120BQ96EK7 910 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 PGM2Q96G03 612 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 MAGED4Q96JG8 741 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 RILPQ96NA2 401 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 OR52B2Q96RD2 323 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CCT7Q99832 543 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 NEURL2Q9BR09 285 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 LMF2Q9BU23 707 aaKnown RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 UCK2Q9BZX2 261 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 ROPN1BQ9BZX4 212 aaPredicted RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 CSTL1Q9H114 145 aa4.3□□□□□ -1.72
CCNB3-208ENST00000493507 WDR55Q9H6Y2 383 aaPredicted RBP4.3□□□□□ -1.72
CCNB3-208ENST00000493507 ROPN1Q9HAT0 212 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms