RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 MRPL37Q9BZE1 423 aaKnown RBP4.25□□□□□ -1.73
SND1-216ENST00000492840 WDR13Q9H1Z4 485 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 MOB1AQ9H8S9 216 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 CHRAC1Q9NRG0 131 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 INPP5EQ9NRR6 644 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 C20orf96Q9NUD7 363 aaPredicted RBP4.25□□□□□ -1.73
SND1-216ENST00000492840 ELOVL2Q9NXB9 296 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 PTTG3PQ9NZH4 202 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 NUDT4Q9NZJ9 180 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 ZMAT5Q9UDW3 170 aaKnown RBP4.25□□□□□ -1.73
SND1-216ENST00000492840 MLXQ9UH92 298 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 AHCTF1Q8WYP5 2266 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 PTPRBP23467 1997 aa4.25□□□□□ -1.73
SND1-216ENST00000492840 DOCK6Q96HP0 2047 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 SAGE2PA6NJ88 616 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 PP2D1A8MPX8 630 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 E9PAM4 449 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 FCN1O00602 326 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 OR2J3O76001 311 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 P04436 131 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 SERPIND1P05546 499 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 HSD17B1P14061 328 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 GNB3P16520 340 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 ZNF43P17038 809 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 POLR2EP19388 210 aaKnown RBP4.24□□□□□ -1.73
SND1-216ENST00000492840 IGFBP5P24593 272 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 CCNE1P24864 410 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 ETV5P41161 510 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 SLC8A3P57103 927 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 RAB11AP62491 216 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 IRF8Q02556 426 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 RAB11BQ15907 218 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 MRPL23Q16540 153 aaKnown RBP4.24□□□□□ -1.73
SND1-216ENST00000492840 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 LIN9Q5TKA1 542 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 FAM199XQ6PEV8 388 aaPredicted RBP4.24□□□□□ -1.73
SND1-216ENST00000492840 HSDL2Q6YN16 418 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 VTCN1Q7Z7D3 282 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 RNF130Q86XS8 419 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 MICU2Q8IYU8 434 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 OR4F6Q8NGB9 312 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 OR9A1PQ8NGU1 263 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 IL1F10Q8WWZ1 152 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 ELSPBP1Q96BH3 223 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 FAF2Q96CS3 445 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 ATXN7L3BQ96GX2 97 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 GMPPAQ96IJ6 420 aaPredicted RBP4.24□□□□□ -1.73
SND1-216ENST00000492840 PLEKHA8Q96JA3 519 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 CNN2Q99439 309 aaKnown RBP4.24□□□□□ -1.73
SND1-216ENST00000492840 HSD17B14Q9BPX1 270 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 MAPKAP1Q9BPZ7 522 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 ZNF670Q9BS34 389 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 RAB34Q9BZG1 259 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 API5Q9BZZ5 524 aaKnown RBP4.24□□□□□ -1.73
SND1-216ENST00000492840 PPA2Q9H2U2 334 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 SP140LQ9H930 580 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 LZTFL1Q9NQ48 299 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 BFARQ9NZS9 450 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 RARRES3Q9UL19 164 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 MGAT4AQ9UM21 535 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 GAB2Q9UQC2 676 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 STK38LQ9Y2H1 464 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 MRPL11Q9Y3B7 192 aaKnown RBP4.24□□□□□ -1.73
SND1-216ENST00000492840 PYGO1Q9Y3Y4 419 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 ATG2BQ96BY7 2078 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 LAMA5O15230 3695 aa4.24□□□□□ -1.73
SND1-216ENST00000492840 SPTBN1Q01082 2364 aaKnown RBP4.24□□□□□ -1.73
SND1-216ENST00000492840 TRGV8A0A0C4DH27 118 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 ARHGEF33A8MVX0 844 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 ZNF701M0R085 212 aaPredicted RBP4.23□□□□□ -1.73
SND1-216ENST00000492840 EIF3HO15372 352 aaKnown RBP eCLIP4.23□□□□□ -1.73
SND1-216ENST00000492840 NVLO15381 856 aaKnown RBP4.23□□□□□ -1.73
SND1-216ENST00000492840 CLOCKO15516 846 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 RRP8O43159 456 aaKnown RBP4.23□□□□□ -1.73
SND1-216ENST00000492840 CXCL13O43927 109 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 PFKFB2O60825 505 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 NPPAP01160 153 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 GSTM3P21266 225 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 MSR1P21757 451 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 HOXA9P31269 272 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 OPRD1P41143 372 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 THBS3P49746 956 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 LIM2P55344 173 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 ERVFC1-1P60608 527 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 KCNJ2P63252 427 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 SRPXP78539 464 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 PHEXP78562 749 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 PAX5Q02548 391 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 IL18R1Q13478 541 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 LY6DQ14210 128 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 CYP51A1Q16850 503 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 TRIM16LQ309B1 348 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 ADAMTSL4-AS1Q5T5F5 129 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 LGSNQ5TDP6 509 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 REP15Q6BDI9 236 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 SASS6Q6UVJ0 657 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 LINC00523Q86TU6 105 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 MFSD6LQ8IWD5 586 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 ITFG1Q8TB96 612 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms