RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CMAHPQ9Y471 501 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 WIF1Q9Y5W5 379 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CEPT1Q9Y6K0 416 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 XIRP2A4UGR9 3374 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PTPN13Q12923 2485 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TLN1Q9Y490 2541 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 LOC100509620A0A075B734 347 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 TVP23AA6NH52 213 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CLCA1A8K7I4 914 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 B8ZZF3 427 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 TGFBR3LH3BV60 316 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 FAAHO00519 579 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CBR3O75828 277 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 IL2RAP01589 272 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CT45A8P0DMV1 189 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CT45A9P0DMV2 189 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SMIM10L1P0DMW3 83 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 C7P10643 843 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 COX6A1P12074 109 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PRKCAP17252 672 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 RAB3BP20337 219 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 GSTM3P21266 225 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 BMP5P22003 454 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CSRP3P50461 194 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 POLR2HP52434 150 aaKnown RBP4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SMSP52788 366 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 HSF1Q00613 529 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CD226Q15762 336 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CT45A2Q5DJT8 189 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 AGAP6Q5VW22 663 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PEAR1Q5VY43 1037 aaPredicted RBP4.07□□□□□ -1.76
TRA2B-215ENST00000492417 VHLLQ6RSH7 139 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 NPSR1Q6W5P4 371 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 COX15Q7KZN9 410 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SHFQ7M4L6 423 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 AAED1Q7RTV5 226 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 KANSL1Q7Z3B3 1105 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PTOV1Q86YD1 416 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PDZD9Q8IXQ8 264 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 ADGRG5Q8IZF4 528 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 C10orf111Q8N326 155 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 OR51G2Q8NGK0 314 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PFN4Q8NHR9 129 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 THAP6Q8TBB0 222 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 M1APQ8TC57 530 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CCDC107Q8WV48 283 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SMIM10Q96HG1 83 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 MED30Q96HR3 178 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PRRC1Q96M27 445 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SARGQ9BW04 601 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 AMBRA1Q9C0C7 1298 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 FANCFQ9NPI8 374 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 ERVK-18Q9QC07 812 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SEC14L4Q9UDX3 406 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CHRNA9Q9UGM1 479 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CNOT11Q9UKZ1 510 aaKnown RBP4.07□□□□□ -1.76
TRA2B-215ENST00000492417 TP53TG5Q9Y2B4 290 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 NOSIPQ9Y314 301 aaKnown RBP4.07□□□□□ -1.76
TRA2B-215ENST00000492417 MED13LQ71F56 2210 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 FAM90A27PA6NNH2 459 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 C1orf196B1AJZ1 125 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PYCARD-AS1I3L0S3 204 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PRODHO43272 600 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SNAPC5O75971 98 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 RLN2P04090 185 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 HLA-DPB1P04440 258 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 HMGN1P05114 100 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 UMODP07911 640 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 HTR2AP28223 471 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CASP3P42574 277 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF117Q03924 483 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PLP2Q04941 152 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 ATXN7L3Q14CW9 347 aaPredicted RBP4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PCOLCEQ15113 449 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 EIF2S3LQ2VIR3 472 aaKnown RBP4.07□□□□□ -1.76
TRA2B-215ENST00000492417 TIGD3Q6B0B8 471 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SLC27A4Q6P1M0 643 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 GDF7Q7Z4P5 450 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SNX29P2Q8IUI4 249 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 LRRC18Q8N456 261 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CHST4Q8NCG5 386 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CNIH3Q8TBE1 160 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 CHPT1Q8WUD6 406 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 TTC9Q92623 222 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 LRRC46Q96FV0 321 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 VSTM2LQ96N03 204 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 GAL3ST1Q99999 423 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 LMF2Q9BU23 707 aaKnown RBP4.07□□□□□ -1.76
TRA2B-215ENST00000492417 GON7Q9BXV9 100 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 ABCG5Q9H222 651 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 A4GALTQ9NPC4 353 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 TMEM45AQ9NWC5 275 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF639Q9UID6 485 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 FBXL2Q9UKC9 423 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 MGAT4BQ9UQ53 548 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PCDHGB6Q9Y5F9 930 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SCN8AQ9UQD0 1980 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 TRANK1O15050 2925 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 PCDH15Q96QU1 1955 aa4.07□□□□□ -1.76
TRA2B-215ENST00000492417 SPTBN5Q9NRC6 3674 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms