RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 LOC100289279A0A1B0GTE1 492 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 TMEM229AB2RXF0 380 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 FTCDNL1E5RQL4 147 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 SDHDO14521 159 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 FRS3O43559 492 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 IGKV3-15P01624 115 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 APEHP13798 732 aaKnown RBP7.94□□□□□ -1.14
HDAC3-212ENST00000492407 CBR1P16152 277 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF23P17027 643 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 TMEM11P17152 192 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 IL12AP29459 219 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 ARR3P36575 388 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 CDKN2CP42773 168 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 EVX1P49640 407 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 IDH3GP51553 393 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-212ENST00000492407 SLC18A1P54219 525 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 NAAAQ02083 359 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 BST1Q10588 318 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 MFSD13AQ14CX5 517 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 ADIPOQQ15848 244 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF124Q15973 351 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 CDONQ4KMG0 1287 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 HIKESHIQ53FT3 197 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 COX20Q5RI15 118 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF362Q5T0B9 420 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-212ENST00000492407 C9orf135Q5VTT2 229 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 FAM122CQ6P4D5 195 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF836Q6ZNA1 936 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 GPAT4Q86UL3 456 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 EPHX4Q8IUS5 362 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 OR6S1Q8NH40 331 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 SLC38A5Q8WUX1 472 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 C3orf49Q96BT1 292 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 FBXO17Q96EF6 278 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 SORCS2Q96PQ0 1159 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 NDEL1Q9GZM8 345 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 EVA1AQ9H8M9 152 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 TPT1P8Q9HAU6 139 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 PNPOQ9NVS9 261 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 RLIMQ9NVW2 624 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 ZIM2Q9NZV7 527 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 CBY1Q9Y3M2 126 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 PCDHB14Q9Y5E9 798 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 CAPN7Q9Y6W3 813 aa7.94□□□□□ -1.14
HDAC3-212ENST00000492407 CUBNO60494 3623 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 SNTNA6NMZ2 147 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 KLF11O14901 512 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 AKAP8O43823 692 aaKnown RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 SNNO75324 88 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 SLC43A1O75387 559 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF432O94892 652 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 AHSA1O95433 338 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 LGI1O95970 557 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 GSNP06396 782 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 S100A9P06702 114 aaKnown RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 TACSTD2P09758 323 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 OR4A8P0C604 315 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 GSTT2P0CG29 244 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 GSTT2BP0CG30 244 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 PNMTP11086 282 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 BMP2P12643 396 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF43P17038 809 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 CDH2P19022 906 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 NCF2P19878 526 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 NPR2P20594 1047 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 BGNP21810 368 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 PCMT1P22061 227 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 CRATP43155 626 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 SELENOPP49908 381 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 RIPK1Q13546 671 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 GGTLC2Q14390 218 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 FAM120AOSQ5T036 256 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 LIPNQ5VXI9 398 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ATG16L1Q676U5 607 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 LIN54Q6MZP7 749 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 NIPAL3Q6P499 406 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 SLC46A3Q7Z3Q1 461 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 HMGN2P46Q86SG4 172 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 VRK2Q86Y07 508 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ALDH16A1Q8IZ83 802 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF786Q8N393 782 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 CADM2Q8N3J6 435 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ADPRHL1Q8NDY3 354 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 HTRA1Q92743 480 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 MSI2Q96DH6 328 aaKnown RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 DNAJA3Q96EY1 480 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 C1orf159Q96HA4 380 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ITCHQ96J02 903 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 LRR1Q96L50 414 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 FOXN4Q96NZ1 517 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 OXGR1Q96P68 337 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 DOK1Q99704 481 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 NUDT16L1Q9BRJ7 211 aaKnown RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 PRR14Q9BWN1 585 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 KCNK9Q9NPC2 374 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 A4GALTQ9NPC4 353 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 SDR39U1Q9NRG7 319 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ADPRHL2Q9NX46 363 aa7.93□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF443Q9Y2A4 671 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-212ENST00000492407 RTTNQ86VV8 2226 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms