RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ANP32DO95626 131 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 AVPP01185 164 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 IL6P05231 212 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 ZCCHC18P0CG32 403 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 NQO1P15559 274 aaKnown RBP17.67■□□□□ 0.42
CLIP2-208ENST00000491075 GIPRP48546 466 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 RAB1AP62820 205 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 NKPD1Q17RQ9 610 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 GLIPR1L2Q4G1C9 344 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 FOXB1Q99853 325 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 EMC6Q9BV81 110 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 ULBP2Q9BZM5 246 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 TPT1P8Q9HAU6 139 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 KLHL14Q9P2G3 628 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 GPR160Q9UJ42 338 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 CORINQ9Y5Q5 1042 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 GPR45Q9Y5Y3 372 aa17.67■□□□□ 0.42
CLIP2-208ENST00000491075 J3QLI3 93 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 MPZL1O95297 269 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 BCL10O95999 233 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 HPRP00739 348 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 PDCD4Q53EL6 469 aaKnown RBP17.66■□□□□ 0.42
CLIP2-208ENST00000491075 BPIFB2Q8N4F0 458 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 LSMEM1Q8N8F7 131 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 DNAJA4Q8WW22 397 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-208ENST00000491075 SLC41A3Q96GZ6 507 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 SLC6A7Q99884 636 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 TMPRSS13Q9BYE2 586 aa17.66■□□□□ 0.42
CLIP2-208ENST00000491075 IGKV1D-42A0A075B6H8 117 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 A0A087WUJ7 227 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 A0A1B0GWA3 101 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 MS4A18H0YCH9 400 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 SDHDO14521 159 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 HLA-DOBP13765 273 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 CBLP22681 906 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 MAGEB1P43366 347 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 AQP5P55064 265 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 SELENOVP59797 346 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 MS4A18Q3C1V0 323 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 PCGF3Q3KNV8 242 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 ALG10BQ5I7T1 473 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 RGS7BPQ6MZT1 257 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-208ENST00000491075 SCAIQ8N9R8 606 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 OR6N1Q8NGY5 312 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 OR6S1Q8NH40 331 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 NANPQ8TBE9 248 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 ZNF696Q9H7X3 374 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 BCL2L10Q9HD36 194 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 MED29Q9NX70 200 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 TGP01266 2768 aa17.65■□□□□ 0.42
CLIP2-208ENST00000491075 C17orf100A8MU93 164 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 TMPRSS2O15393 492 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 PLPP2O43688 288 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 SERPINA5P05154 406 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 TEKQ02763 1124 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 CAMK2DQ13557 499 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 RAB39AQ14964 217 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 DCAF12L2Q5VW00 463 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 TMEM154Q6P9G4 183 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 BBS10Q8TAM1 723 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 SNX33Q8WV41 574 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 EPYCQ99645 322 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 ZNF747Q9BV97 191 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 ASPNQ9BXN1 380 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 RMND5AQ9H871 391 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 ESM1Q9NQ30 184 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 HINT3Q9NQE9 182 aaKnown RBP17.64■□□□□ 0.41
CLIP2-208ENST00000491075 PNPOQ9NVS9 261 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 TAAR3PQ9P1P4 343 aa17.64■□□□□ 0.41
CLIP2-208ENST00000491075 SLC22A23A1A5C7 686 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 ZNF726A6NNF4 738 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 TM9SF1O15321 606 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 CDC14BO60729 498 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 ENTPD5O75356 428 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 DEAF1O75398 565 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-208ENST00000491075 BGNP21810 368 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 GATA3P23771 443 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 HTR2AP28223 471 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 KLF3P57682 345 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-208ENST00000491075 CCL8P80075 99 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 MVKQ03426 396 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 PUDPQ08623 228 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 STX3Q13277 289 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 ALKBH6Q3KRA9 238 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 GTDC1Q4AE62 458 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 AVPI1Q5T686 147 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 FAM91A1Q658Y4 838 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 SHISA2Q6UWI4 295 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 MSANTD1Q6ZTZ1 278 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 PIWIL3Q7Z3Z3 882 aaKnown RBP17.63■□□□□ 0.41
CLIP2-208ENST00000491075 ZNF584Q8IVC4 421 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 ZDHHC22Q8N966 263 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 VPS33AQ96AX1 596 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 ITCHQ96J02 903 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 TXNDC15Q96J42 360 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 SSU72Q9NP77 194 aaKnown RBP17.63■□□□□ 0.41
CLIP2-208ENST00000491075 A4GALTQ9NPC4 353 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 NKIRAS2Q9NYR9 191 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 PCDHGB1Q9Y5G3 927 aa17.63■□□□□ 0.41
CLIP2-208ENST00000491075 SLC22A3O75751 556 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms