RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 KRR1Q13601 381 aaKnown RBP16.55■□□□□ 0.24
MCF2L-230ENST00000491028 MELKQ14680 651 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 ARMC4Q5T2S8 1044 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 RIPPLY2Q5TAB7 128 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 TMEM236Q5W0B7 351 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 TMEM211Q6ICI0 200 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 ACSM5Q6NUN0 579 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 CASP12Q6UXS9 341 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 ADCK1Q86TW2 530 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 ATCAYQ86WG3 371 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 TUSC5Q8IXB3 177 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 RPRMLQ8N4K4 120 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 OR6X1Q8NH79 312 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 CYGBQ8WWM9 190 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 TXNDC15Q96J42 360 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 Q96M85 177 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 ZNF385AQ96PM9 386 aaKnown RBP16.55■□□□□ 0.24
MCF2L-230ENST00000491028 ZNF184Q99676 751 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-230ENST00000491028 CMC2Q9NRP2 79 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 PARPBPQ9NWS1 579 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 KLHL21Q9UJP4 597 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 CLEC4AQ9UMR7 237 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 OSGIN2Q9Y236 505 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 NOSIPQ9Y314 301 aaKnown RBP16.55■□□□□ 0.24
MCF2L-230ENST00000491028 EMC9Q9Y3B6 208 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 GMPPBQ9Y5P6 360 aa16.55■□□□□ 0.24
MCF2L-230ENST00000491028 MED12LQ86YW9 2145 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 SLC35F4A4IF30 521 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 XKRYO14609 159 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 IFNGP01579 166 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 GLI4P10075 376 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 CEACAM8P31997 349 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-230ENST00000491028 ACVR1BP36896 505 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 CDC42P60953 191 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 MRPL49Q13405 166 aaKnown RBP16.54■□□□□ 0.24
MCF2L-230ENST00000491028 C3P1Q6ZMU1 363 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 FAM214BQ7L5A3 538 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 AAED1Q7RTV5 226 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 TFAP2CQ92754 450 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 RASD2Q96D21 266 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 SNX18Q96RF0 628 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 DMRTA2Q96SC8 542 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 SH3BGRL2Q9UJC5 107 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 KALRNO60229 2985 aa16.54■□□□□ 0.24
MCF2L-230ENST00000491028 ZNF726A6NNF4 738 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 SURF4O15260 269 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 AHCYL1O43865 530 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 MRPL33O75394 65 aaKnown RBP16.53■□□□□ 0.24
MCF2L-230ENST00000491028 ZNF432O94892 652 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 TOXO94900 526 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 IGHG1P01857 330 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 TMIGD3P0DMS9 266 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-230ENST00000491028 NR2C1P13056 603 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 ACADSP16219 412 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 HIST1H1CP16403 213 aaKnown RBP16.53■□□□□ 0.24
MCF2L-230ENST00000491028 IL18R1Q13478 541 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 MESTQ5EB52 335 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 NIPAL3Q6P499 406 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 JAZF1Q86VZ6 243 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 GCNT2Q8N0V5 402 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 DEPDC4Q8N2C3 294 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 OR6K3Q8NGY3 331 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 FAM81AQ8TBF8 368 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 FNDC8Q8TC99 324 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 INTS12Q96CB8 462 aaKnown RBP16.53■□□□□ 0.24
MCF2L-230ENST00000491028 SLC25A44Q96H78 314 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-230ENST00000491028 PLEKHA8Q96JA3 519 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 OR2M2Q96R28 347 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 APOL4Q9BPW4 351 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 EMC6Q9BV81 110 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 RAB26Q9ULW5 256 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 MEMO1Q9Y316 297 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 ZFYVE26Q68DK2 2539 aa16.53■□□□□ 0.24
MCF2L-230ENST00000491028 OR6C65A6NJZ3 312 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 RIIAD1A6NNX1 92 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 HSPB2A8KAH6 182 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 SLC43A1O75387 559 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 ZNF3P17036 446 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 PCYT1AP49585 367 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.52■□□□□ 0.24
MCF2L-230ENST00000491028 HSPB2Q16082 182 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 SNAPC1Q16533 368 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 SLC35F1Q5T1Q4 408 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 TMEM123Q8N131 208 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 MARVELD2Q8N4S9 558 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 SETD9Q8NE22 299 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 NOXO1Q8NFA2 376 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 OR52E2Q8NGJ4 325 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 TRUB1Q8WWH5 349 aaKnown RBP16.52■□□□□ 0.24
MCF2L-230ENST00000491028 ZNF566Q969W8 418 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 ALG12Q9BV10 488 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 SFXN3Q9BWM7 321 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 FN3KQ9H479 309 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 IMPAD1Q9NX62 359 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 TVP23BQ9NYZ1 205 aa16.52■□□□□ 0.24
MCF2L-230ENST00000491028 ARHGEF9O43307 516 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 TRMUO75648 421 aaKnown RBP16.51■□□□□ 0.23
MCF2L-230ENST00000491028 RENP00797 406 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 PGA4P0DJD7 388 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 PGA3P0DJD8 388 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms