RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FXNQ16595 210 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 PXKQ7Z7A4 578 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 RANBP3LQ86VV4 465 aaPredicted RBP10.21□□□□□ -0.77
SRSF4-204ENST00000489898 TREML1Q86YW5 311 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 CDK20Q8IZL9 346 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 FBXL14Q8N1E6 418 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 BHLHE22Q8NFJ8 381 aaPredicted RBP10.21□□□□□ -0.77
SRSF4-204ENST00000489898 OR5J2Q8NH18 312 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 PFN4Q8NHR9 129 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 VANGL1Q8TAA9 524 aaPredicted RBP10.21□□□□□ -0.77
SRSF4-204ENST00000489898 LRRC58Q96CX6 371 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 LRR1Q96L50 414 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 HS6ST2Q96MM7 605 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 ALG2Q9H553 416 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 EVA1AQ9H8M9 152 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 FKRPQ9H9S5 495 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 CMTM6Q9NX76 183 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 MYEF2Q9P2K5 600 aaKnown RBP10.21□□□□□ -0.77
SRSF4-204ENST00000489898 SLC7A7Q9UM01 511 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 ATP23Q9Y6H3 246 aa10.21□□□□□ -0.77
SRSF4-204ENST00000489898 IGHV4-61A0A0C4DH41 118 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 M0R3G1 203 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 PIP5K1CO60331 668 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 MT-ATP6P00846 226 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 HOXB1P14653 301 aaPredicted RBP10.2□□□□□ -0.78
SRSF4-204ENST00000489898 ZNF16P17020 682 aaPredicted RBP10.2□□□□□ -0.78
SRSF4-204ENST00000489898 FUT1P19526 365 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 THBS4P35443 961 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 PPOXP50336 477 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 GUCY1A3Q02108 690 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 SF3A3Q12874 501 aaKnown RBP eCLIP10.2□□□□□ -0.78
SRSF4-204ENST00000489898 CAMK2DQ13557 499 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 MELKQ14680 651 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 CARD17Q5XLA6 110 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 LRFN4Q6PJG9 635 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 ABHD12BQ7Z5M8 362 aaPredicted RBP10.2□□□□□ -0.78
SRSF4-204ENST00000489898 PATL1Q86TB9 770 aaKnown RBP10.2□□□□□ -0.78
SRSF4-204ENST00000489898 SNX32Q86XE0 403 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 UEVLDQ8IX04 471 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 PAQR4Q8N4S7 273 aaPredicted RBP10.2□□□□□ -0.78
SRSF4-204ENST00000489898 PIK3C3Q8NEB9 887 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 TMEM255BQ8WV15 326 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 LIPHQ8WWY8 451 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 FBXO17Q96EF6 278 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 DOK1Q99704 481 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 MRPL13Q9BYD1 178 aaKnown RBP10.2□□□□□ -0.78
SRSF4-204ENST00000489898 RPS6KB2Q9UBS0 482 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 POU2F3Q9UKI9 436 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 A4GNTQ9UNA3 340 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 UGT2A1Q9Y4X1 527 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 NOX1Q9Y5S8 564 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 NBEAL1Q6ZS30 2694 aa10.2□□□□□ -0.78
SRSF4-204ENST00000489898 TRAPPC13A5PLN9 417 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 FAM220BPB1ANY3 271 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 KPNA4O00629 521 aaPredicted RBP10.19□□□□□ -0.78
SRSF4-204ENST00000489898 MRASO14807 208 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 FFAR1O14842 300 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 SHOX2O60902 331 aaPredicted RBP10.19□□□□□ -0.78
SRSF4-204ENST00000489898 SERPINB7O75635 380 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 IGF2P01344 180 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 MMP7P09237 267 aaPredicted RBP10.19□□□□□ -0.78
SRSF4-204ENST00000489898 OR4A8P0C604 315 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 IFNGR1P15260 489 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 ZNF26P17031 533 aaPredicted RBP10.19□□□□□ -0.78
SRSF4-204ENST00000489898 BIDP55957 195 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 NCALDP61601 193 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 RPL18Q07020 188 aaKnown RBP10.19□□□□□ -0.78
SRSF4-204ENST00000489898 ARMC4Q5T2S8 1044 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 HMBOX1Q6NT76 420 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 CARM1Q86X55 608 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 HIPK1Q86Z02 1210 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 SLC30A8Q8IWU4 369 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 ZCCHC24Q8N2G6 241 aaKnown RBP10.19□□□□□ -0.78
SRSF4-204ENST00000489898 LRRC75AQ8NAA5 344 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 OR6X1Q8NH79 312 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 NABP1Q96AH0 204 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 TNFRSF13CQ96RJ3 184 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 EPYCQ99645 322 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 FOXB1Q99853 325 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 SLC19A3Q9BZV2 496 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 TMEM27Q9HBJ8 222 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 ARMCX1Q9P291 453 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 ZNF229Q9UJW7 825 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 TRIM33Q9UPN9 1127 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 SNX13Q9Y5W8 968 aa10.19□□□□□ -0.78
SRSF4-204ENST00000489898 BBIP1A8MTZ0 92 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 C11orf98E9PRG8 122 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 NME4O00746 187 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 TLX2O43763 284 aaPredicted RBP10.18□□□□□ -0.78
SRSF4-204ENST00000489898 NCR1O76036 304 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 CH25HO95992 272 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 F12P00748 615 aaPredicted RBP10.18□□□□□ -0.78
SRSF4-204ENST00000489898 PATE4P0C8F1 98 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 IGFBP5P24593 272 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 GTF2E2P29084 291 aaKnown RBP10.18□□□□□ -0.78
SRSF4-204ENST00000489898 IL2RGP31785 369 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 SERPINF1P36955 418 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 PMS2P3Q13401 168 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 SLC35D2Q76EJ3 337 aa10.18□□□□□ -0.78
SRSF4-204ENST00000489898 LRP11Q86VZ4 500 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms