RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SLC35D3Q5M8T2 416 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 RNLSQ5VYX0 342 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 LEG1Q6P5S2 330 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 AHSA2Q719I0 299 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 SLC35D2Q76EJ3 337 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 HDDC2Q7Z4H3 204 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 SIAH3Q8IW03 269 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 UEVLDQ8IX04 471 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 SPARTQ8N0X7 666 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 MEIOBQ8N635 442 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 CYB561A3Q8NBI2 242 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 EXTL1Q92935 676 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 CPNE4Q96A23 557 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 NMNAT3Q96T66 252 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 HCAR1Q9BXC0 346 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 DEFB127Q9H1M4 99 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 MED20Q9H944 212 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 FGF20Q9NP95 211 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 ERVK-18Q9QC07 812 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 NPIPA1Q9UND3 350 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 EXOGQ9Y2C4 368 aaKnown RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 MED19A0JLT2 244 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-205ENST00000489656 PRSS37A4D1T9 235 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 CENPBD1B2RD01 187 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 H0YC42 278 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 XKRYO14609 159 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 CXCL13O43927 109 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 BCL10O95999 233 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 RENP00797 406 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 CPN1P15169 458 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 IFNGR1P15260 489 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 ATP6V1B1P15313 513 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 NR1H2P55055 460 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 RPS3AP61247 264 aaKnown RBP12.64□□□□□ -0.39
VPS26A-205ENST00000489656 LGALS3BPQ08380 585 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 ST3GAL4Q11206 333 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 LCN1P1Q5VSP4 162 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 TMEM225Q6GV28 225 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 ABLIM2Q6H8Q1 611 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 KDM8Q8N371 416 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 ZPLD1Q8TCW7 415 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 KISS1RQ969F8 398 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-205ENST00000489656 LGALS12Q96DT0 336 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 RNFT2Q96EX2 444 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 ADAD1Q96M93 576 aaKnown RBP12.64□□□□□ -0.39
VPS26A-205ENST00000489656 TAAR6Q96RI8 345 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 TEAD3Q99594 435 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 TSPAN10Q9H1Z9 355 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-205ENST00000489656 LDAHQ9H6V9 325 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 BATF3Q9NR55 127 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 KLHL13Q9P2N7 655 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 SPRR3Q9UBC9 169 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 TP53TG5Q9Y2B4 290 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 SNX5Q9Y5X3 404 aa12.64□□□□□ -0.39
VPS26A-205ENST00000489656 PHF3Q92576 2039 aaKnown RBP12.63□□□□□ -0.39
VPS26A-205ENST00000489656 AQP7O14520 342 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 ARHGEF9O43307 516 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 RAMP1O60894 148 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 SERPINI2O75830 405 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 MT-ND2P03891 347 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 TFAP2AP05549 437 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 STSP08842 583 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 ZNF43P17038 809 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 JUNBP17275 347 aaPredicted RBP12.63□□□□□ -0.39
VPS26A-205ENST00000489656 SPI1P17947 270 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 KLK2P20151 261 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 PCMT1P22061 227 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 RPL5P46777 297 aaKnown RBP12.63□□□□□ -0.39
VPS26A-205ENST00000489656 EIF1AXP47813 144 aaKnown RBP12.63□□□□□ -0.39
VPS26A-205ENST00000489656 ALDH3B2P48448 385 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 SLC16A1P53985 500 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 MVKQ03426 396 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 GGTLC2Q14390 218 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 IRF3Q14653 427 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 SLC17A1Q14916 467 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 B3GNT6Q6ZMB0 384 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 ZBTB46Q86UZ6 589 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 STX19Q8N4C7 294 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 KDF1Q8NAX2 398 aaPredicted RBP12.63□□□□□ -0.39
VPS26A-205ENST00000489656 OR52I1Q8NGK6 324 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 OR6X1Q8NH79 312 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 C9orf43Q8TAL5 461 aaPredicted RBP12.63□□□□□ -0.39
VPS26A-205ENST00000489656 PNPLA2Q96AD5 504 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 WDYHV1Q96HA8 205 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 TMEM80Q96HE8 168 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 UCN2Q96RP3 112 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 ALG12Q9BV10 488 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 JAM3Q9BX67 310 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 CDCA4Q9BXL8 241 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 DIMT1Q9UNQ2 313 aaKnown RBP12.63□□□□□ -0.39
VPS26A-205ENST00000489656 MOKQ9UQ07 419 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 FKBP7Q9Y680 259 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 CHD8Q9HCK8 2581 aa12.63□□□□□ -0.39
VPS26A-205ENST00000489656 BSNQ9UPA5 3926 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 SLC22A23A1A5C7 686 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms