RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PLAUP00749 431 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 SEMG1P04279 462 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 CSNK1A1P48729 337 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 ZNF83P51522 516 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 LSM11P83369 360 aaKnown RBP eCLIP15.19■□□□□ 0.02
MDC1-206ENST00000489540 VLDLRP98155 873 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 TRIM25Q14258 630 aaKnown RBP15.19■□□□□ 0.02
MDC1-206ENST00000489540 LAPTM4AQ15012 233 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 CEACAM16Q2WEN9 425 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 TBRG1Q3YBR2 411 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 IQCCQ4KMZ1 466 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 HIKESHIQ53FT3 197 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 MTX3Q5HYI7 312 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 TBPL2Q6SJ96 375 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 HDDC2Q7Z4H3 204 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 CCDC36Q8IYA8 594 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 SLC7A13Q8TCU3 470 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 AKAP1Q92667 903 aaKnown RBP eCLIP15.19■□□□□ 0.02
MDC1-206ENST00000489540 PIGTQ969N2 578 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 ZNF566Q969W8 418 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 SLC25A44Q96H78 314 aaPredicted RBP15.19■□□□□ 0.02
MDC1-206ENST00000489540 FOXC2Q99958 501 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 HIF3AQ9Y2N7 669 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 V9GYQ6 96 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 PDZD2O15018 2839 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 ARPC4-TTLL3A0A0A6YYG9 625 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 ZNF99A8MXY4 864 aaPredicted RBP15.18■□□□□ 0.02
MDC1-206ENST00000489540 EFCAB9A8MZ26 197 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 HS3ST1O14792 307 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 F13BP05160 661 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 SAGP10523 405 aaPredicted RBP15.18■□□□□ 0.02
MDC1-206ENST00000489540 CD53P19397 219 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 MAKP20794 623 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 SLC9A3P48764 834 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 DAP3P51398 398 aaKnown RBP15.18■□□□□ 0.02
MDC1-206ENST00000489540 ART1P52961 327 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 PHYHD1Q5SRE7 291 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 PODNL1Q6PEZ8 512 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 TMPRSS11FQ6ZWK6 438 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 OAFQ86UD1 273 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 DHFR2Q86XF0 187 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 ZNF611Q8N823 705 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 MOSPD2Q8NHP6 518 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 TMEM54Q969K7 222 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 DHRS1Q96LJ7 313 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 ZNF347Q96SE7 839 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 C1QTNF6Q9BXI9 259 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 ULBP2Q9BZM5 246 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 IL1RAPQ9NPH3 570 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 GLTPQ9NZD2 209 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 STX18Q9P2W9 335 aaKnown RBP15.18■□□□□ 0.02
MDC1-206ENST00000489540 TMEM5Q9Y2B1 443 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 POFUT2Q9Y2G5 429 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 AKAP6Q13023 2319 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 CCDC168Q8NDH2 2452 aa15.18■□□□□ 0.02
MDC1-206ENST00000489540 NPIPB13A6NJU9 1138 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 CENPBD1B2RD01 187 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 NPIPB4C9JG80 1138 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 MCIDASD6RGH6 385 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 UBOX5O94941 541 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 IGHG1P01857 330 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 FABP3P05413 133 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 CD40P25942 277 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 TAF11Q15544 211 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 TESK1Q15569 626 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 DEFB113Q30KQ7 82 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 ALG10Q5BKT4 473 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 FGD3Q5JSP0 725 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 CYP2R1Q6VVX0 501 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 DEPDC4Q8N2C3 294 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 ZNF837Q96EG3 531 aaPredicted RBP15.17■□□□□ 0.02
MDC1-206ENST00000489540 ALPK1Q96QP1 1244 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 KRCC1Q9NPI7 259 aaPredicted RBP15.17■□□□□ 0.02
MDC1-206ENST00000489540 BEX4Q9NWD9 120 aaPredicted RBP15.17■□□□□ 0.02
MDC1-206ENST00000489540 LRBAP50851 2863 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 CSMD2Q7Z408 3487 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 A0A096LPE4 126 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 A0A1W2PPZ6 126 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 M0R1B8 84 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 ABCD4O14678 606 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 DIRAS1O95057 198 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 STAMBPO95630 424 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 RPS4XP62701 263 aaKnown RBP15.17■□□□□ 0.02
MDC1-206ENST00000489540 MELKQ14680 651 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 ZNF672Q499Z4 452 aaPredicted RBP15.17■□□□□ 0.02
MDC1-206ENST00000489540 DNAL1Q4LDG9 190 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 LCN8Q6JVE9 175 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 ZNF627Q7L945 461 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 PIWIL3Q7Z3Z3 882 aaKnown RBP15.17■□□□□ 0.02
MDC1-206ENST00000489540 WDFY1Q8IWB7 410 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 FAM169BQ8N8A8 192 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 OR51A7Q8NH64 312 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 LILRB1Q8NHL6 650 aaPredicted RBP15.17■□□□□ 0.02
MDC1-206ENST00000489540 ASB9Q96DX5 294 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 TNFRSF13CQ96RJ3 184 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 THTPAQ9BU02 230 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 TXNIPQ9H3M7 391 aa15.17■□□□□ 0.02
MDC1-206ENST00000489540 TACC2O95359 2948 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 GYG2O15488 501 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 TMCC2O75069 709 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms