RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CA10Q9NS85 328 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 TAS2R5Q9NYW4 299 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 CRNNQ9UBG3 495 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-206ENST00000489142 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 FAM220BPB1ANY3 271 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 RNF13O43567 381 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 IGKV3-15P01624 115 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 CD79AP11912 226 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 FUT4P22083 530 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 TAS2R41P59536 307 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 PIN1Q13526 163 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-206ENST00000489142 CYBRD1Q53TN4 286 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 ERICH5Q6P6B1 374 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF813Q6ZN06 617 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 SLC35D2Q76EJ3 337 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 SLC46A3Q7Z3Q1 461 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 PCYOX1LQ8NBM8 494 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 ANKK1Q8NFD2 765 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 OR2T12Q8NG77 320 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 RASSF5Q8WWW0 418 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF317Q96PQ6 595 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF426Q9BUY5 554 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 B3GAT2Q9NPZ5 323 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 GID8Q9NWU2 228 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 CMTM6Q9NX76 183 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 POFUT2Q9Y2G5 429 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 HIVEP2P31629 2446 aa12.17□□□□□ -0.46
VTI1A-206ENST00000489142 BLOC1S5-TXNDC5H3BN57 136 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 H7C417 338 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 GPRIN2O60269 458 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 PIP5K1CO60331 668 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 NPPAP01160 153 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 ASAH2BP0C7U1 165 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 PATE4P0C8F1 98 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 CBR1P16152 277 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 FUT1P19526 365 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 SERPINF1P36955 418 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 CSNK1A1P48729 337 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 HGFACQ04756 655 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 CHRNB3Q05901 458 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 ADIPOQQ15848 244 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 CLEC2AQ6UVW9 174 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 NANOGNBQ7Z5D8 188 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 TREML1Q86YW5 311 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 MICU2Q8IYU8 434 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 ANKS4BQ8N8V4 417 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 MPP4Q96JB8 637 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 LRR1Q96L50 414 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 SORCS2Q96PQ0 1159 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 RHNO1Q9BSD3 238 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 MED4Q9NPJ6 270 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 C20orf141Q9NUB4 165 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 MRGBPQ9NV56 204 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 RIMS3Q9UJD0 308 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 BAG5Q9UL15 447 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 YLPM1P49750 1951 aaKnown RBP12.16□□□□□ -0.46
VTI1A-206ENST00000489142 ABCA1O95477 2261 aa12.16□□□□□ -0.46
VTI1A-206ENST00000489142 IGHV2OR16-5A0A0B4J2B6 119 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 HIST1H2ABP04908 130 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 F13BP05160 661 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 OR4A8P0C604 315 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 COX4I1P13073 169 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-206ENST00000489142 KDELR2P33947 212 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 THBS4P35443 961 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 YAP1P46937 504 aaKnown RBP12.15□□□□□ -0.46
VTI1A-206ENST00000489142 PPP2R2BQ00005 443 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 MYBPC1Q00872 1141 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 RPL18Q07020 188 aaKnown RBP12.15□□□□□ -0.46
VTI1A-206ENST00000489142 SWI5Q1ZZU3 235 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 KRTAP21-3Q3LHN1 58 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 C1QTNF12Q5T7M4 302 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 KRT80Q6KB66 452 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 HIST3H2AQ7L7L0 130 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 VTCN1Q7Z7D3 282 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 MEX3DQ86XN8 651 aaKnown RBP12.15□□□□□ -0.46
VTI1A-206ENST00000489142 NANOS1Q8WY41 292 aaKnown RBP12.15□□□□□ -0.46
VTI1A-206ENST00000489142 HIST1H2ACQ93077 130 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 FOXB1Q99853 325 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 VRK1Q99986 396 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF224Q9NZL3 707 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF229Q9UJW7 825 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 PMF1-BGLAPU3KQ54 211 aa12.15□□□□□ -0.46
VTI1A-206ENST00000489142 CHD3Q12873 2000 aaKnown RBP12.15□□□□□ -0.47
VTI1A-206ENST00000489142 SONP18583 2426 aaKnown RBP12.15□□□□□ -0.47
VTI1A-206ENST00000489142 A0A096LNT2 108 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 ELOVL7A1L3X0 281 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 OR7A10O76100 309 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 OR5F1O95221 314 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 IFNA14P01570 189 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 MT-ND1P03886 318 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 ARR3P36575 388 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 AQP2P41181 271 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 GIPRP48546 466 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 PTDSS1P48651 473 aaKnown RBP12.14□□□□□ -0.47
VTI1A-206ENST00000489142 SNRPD2P62316 118 aaKnown RBP12.14□□□□□ -0.47
VTI1A-206ENST00000489142 LSM11P83369 360 aaKnown RBP eCLIP12.14□□□□□ -0.47
VTI1A-206ENST00000489142 LIPEQ05469 1076 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 RUNX1T1Q06455 604 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms