RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 LINC00471Q8N535 108 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 GNPDA2Q8TDQ7 276 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 KISS1RQ969F8 398 aaPredicted RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 TMEM54Q969K7 222 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 RSRC1Q96IZ7 334 aaKnown RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 ADAD1Q96M93 576 aaKnown RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 ACTR6Q9GZN1 396 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 YY1AP1Q9H869 796 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 GPR35Q9HC97 309 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 KRCC1Q9NPI7 259 aaPredicted RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 ZNF346Q9UL40 294 aaKnown RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 SIGLEC7Q9Y286 467 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 SAMHD1Q9Y3Z3 626 aaKnown RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 ADGRG4Q8IZF6 3080 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 CIB4A0PJX0 185 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 RPL36A-HNRNPH2H7BZ11 118 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 M0R3G1 203 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 GNGT2O14610 69 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 TIPRLO75663 272 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 CCNB2O95067 398 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 IL32P24001 234 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 IST1P53990 364 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 FXYD6P3P58550 94 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 RUNX1T1Q06455 604 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 MICAQ29983 383 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 ARMC4Q5T2S8 1044 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 LRFN4Q6PJG9 635 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 OR9Q2Q8NGE9 314 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 ASB10Q8WXI3 467 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 ZNF837Q96EG3 531 aaPredicted RBP13.33□□□□□ -0.28
FDPS-213ENST00000489003 SLC25A44Q96H78 314 aaPredicted RBP13.33□□□□□ -0.28
FDPS-213ENST00000489003 ZC3HAV1LQ96H79 300 aaKnown RBP13.33□□□□□ -0.28
FDPS-213ENST00000489003 USB1Q9BQ65 265 aaKnown RBP13.33□□□□□ -0.28
FDPS-213ENST00000489003 MED18Q9BUE0 208 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 TXNIPQ9H3M7 391 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 TAS2R16Q9NYV7 291 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 DNAJB9Q9UBS3 223 aa13.33□□□□□ -0.28
FDPS-213ENST00000489003 MCIDASD6RGH6 385 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 ZNF587BE7ETH6 402 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 CASKO14936 926 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 TRMUO75648 421 aaKnown RBP13.32□□□□□ -0.28
FDPS-213ENST00000489003 RAD51DO75771 328 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 PRF1P14222 555 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 FPR3P25089 353 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 ACTR3P61158 418 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 RPL27P61353 136 aaKnown RBP13.32□□□□□ -0.28
FDPS-213ENST00000489003 ERVK-25P63136 954 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 ARF1P84077 181 aaKnown RBP13.32□□□□□ -0.28
FDPS-213ENST00000489003 ROR2Q01974 943 aaKnown RBP13.32□□□□□ -0.28
FDPS-213ENST00000489003 TSPAN31Q12999 210 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 GK3PQ14409 553 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 TAF11Q15544 211 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 TAB1Q15750 504 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 RFX4Q33E94 735 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 HMBOX1Q6NT76 420 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 ABHD12BQ7Z5M8 362 aaPredicted RBP13.32□□□□□ -0.28
FDPS-213ENST00000489003 GPR137CQ8N3F9 429 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 OR6N1Q8NGY5 312 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 HSD17B8Q92506 261 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 MRPL13Q9BYD1 178 aaKnown RBP13.32□□□□□ -0.28
FDPS-213ENST00000489003 NTN4Q9HB63 628 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 CRLF2Q9HC73 371 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 ARMC1Q9NVT9 282 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 GLTPQ9NZD2 209 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 AP4S1Q9Y587 144 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 NBPF19A0A087WUL8 3843 aa13.32□□□□□ -0.28
FDPS-213ENST00000489003 FLNBO75369 2602 aaKnown RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 FAM221AA4D161 298 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 NPIPB13A6NJU9 1138 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 NPIPB4C9JG80 1138 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 NDUFB2O95178 105 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 IGHMP01871 453 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 CD14P08571 375 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 PGA4P0DJD7 388 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 PGA3P0DJD8 388 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 ACADSP16219 412 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 CDH2P19022 906 aaPredicted RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 RPL4P36578 427 aaKnown RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 CSNK1A1P48729 337 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 DAP3P51398 398 aaKnown RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 KPNB1Q14974 876 aaKnown RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 CEACAM16Q2WEN9 425 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 OR7E24Q6IFN5 339 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 WDR31Q8NA23 367 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 OR1K1Q8NGR3 316 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 GIPC3Q8TF64 312 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 HDAC2Q92769 488 aaKnown RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 BCL2L2Q92843 193 aaPredicted RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 ZNF566Q969W8 418 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 C14orf79Q96F83 325 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 BOD1Q96IK1 185 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 ALKBH3Q96Q83 286 aaPredicted RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 TSPAN32Q96QS1 320 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 KATNB1Q9BVA0 655 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 IL20RAQ9UHF4 553 aa13.31□□□□□ -0.28
FDPS-213ENST00000489003 ASH1LQ9NR48 2969 aaKnown RBP13.31□□□□□ -0.28
FDPS-213ENST00000489003 CRYBG3Q68DQ2 2970 aa13.3□□□□□ -0.28
FDPS-213ENST00000489003 OR5H1A6NKK0 313 aa13.3□□□□□ -0.28
FDPS-213ENST00000489003 CENPBD1B2RD01 187 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms