RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 C1orf159Q96HA4 380 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 ZNF75AQ96N20 296 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 TMEM38AQ9H6F2 299 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 TMEM27Q9HBJ8 222 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 MRPL39Q9NYK5 338 aaKnown RBP15.87■□□□□ 0.13
HDAC6-231ENST00000488905 ZNF224Q9NZL3 707 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 VAPAQ9P0L0 249 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 POFUT2Q9Y2G5 429 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 NOX1Q9Y5S8 564 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 GMEB1Q9Y692 573 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 TRBV5-3A0A0A0MS03 114 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 TCF21O43680 179 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 ZNF35P13682 527 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 AQP1P29972 269 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 SRP14P37108 136 aaKnown RBP15.86■□□□□ 0.13
HDAC6-231ENST00000488905 PTDSS1P48651 473 aaKnown RBP15.86■□□□□ 0.13
HDAC6-231ENST00000488905 PIGFQ07326 219 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 PMS2P3Q13401 168 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 CAMK2DQ13557 499 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 CCNIQ14094 377 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 PAGE3Q5JUK9 113 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 SWT1Q5T5J6 900 aaKnown RBP15.86■□□□□ 0.13
HDAC6-231ENST00000488905 NHLRC1Q6VVB1 395 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 RANBP3LQ86VV4 465 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-231ENST00000488905 SNX32Q86XE0 403 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 BHLHE22Q8NFJ8 381 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-231ENST00000488905 OR6N1Q8NGY5 312 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 TXNDC15Q96J42 360 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 ZNF607Q96SK3 696 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 FOXB1Q99853 325 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 WFDC6Q9BQY6 131 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 TMEM43Q9BTV4 400 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 IKZF5Q9H5V7 419 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 CCDC167Q9P0B6 97 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 TMEFF2Q9UIK5 374 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-231ENST00000488905 SLC13A4Q9UKG4 626 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 CORO2BQ9UQ03 480 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 SPEF1Q9Y4P9 236 aa15.86■□□□□ 0.13
HDAC6-231ENST00000488905 LRRN3E7EW58 273 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 TPST2O60704 377 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 SERPINI2O75830 405 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 RAB36O95755 333 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 C8BP07358 591 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 SLC6A2P23975 617 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 AQP5P55064 265 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 CDH12P55289 794 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 RPS23P62266 143 aaKnown RBP15.85■□□□□ 0.13
HDAC6-231ENST00000488905 TRMT5Q32P41 509 aaKnown RBP15.85■□□□□ 0.13
HDAC6-231ENST00000488905 UGT2A3Q6UWM9 527 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 PXKQ7Z7A4 578 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 ARMC8Q8IUR7 673 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 C10orf53Q8N6V4 93 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 C7orf26Q96N11 449 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 SYT3Q9BQG1 590 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 DENND2DQ9H6A0 471 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-231ENST00000488905 TMBIM4Q9HC24 238 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 SLC52A3Q9NQ40 469 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 REV1Q9UBZ9 1251 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 TENM1Q9UKZ4 2725 aa15.85■□□□□ 0.13
HDAC6-231ENST00000488905 ZNF726A6NNF4 738 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 PLPP3O14495 311 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 SERPINB7O75635 380 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 UBL3O95164 117 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 GPX2P18283 190 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 PCMT1P22061 227 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 AHCYP23526 432 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 GLRXP35754 106 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 GIPRP48546 466 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 CSNK1A1P48729 337 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 DVL1P1P54792 670 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-231ENST00000488905 GALK2Q01415 458 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 ELFN2Q5R3F8 820 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 GKAP1Q5VSY0 366 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-231ENST00000488905 RINLQ6ZS11 566 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 HIPK4Q8NE63 616 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 EBF4Q9BQW3 602 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 MS4A5Q9H3V2 200 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 EVA1AQ9H8M9 152 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 FBXL3Q9UKT7 428 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 ANGPT4Q9Y264 503 aa15.84■□□□□ 0.13
HDAC6-231ENST00000488905 TGDSO95455 350 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 MT-ATP6P00846 226 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 ITGA2P17301 1181 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 ALDH3B1P43353 468 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 IDH3AP50213 366 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 RAB1AP62820 205 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 FXNQ16595 210 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 LRP11Q86VZ4 500 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 OR5J2Q8NH18 312 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 CPPED1Q9BRF8 314 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-231ENST00000488905 MYEF2Q9P2K5 600 aaKnown RBP15.83■□□□□ 0.12
HDAC6-231ENST00000488905 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-231ENST00000488905 SLC7A8Q9UHI5 535 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 WNK2Q9Y3S1 2297 aa15.83■□□□□ 0.12
HDAC6-231ENST00000488905 EVPLLA8MZ36 301 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 B4DSR2 109 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 C11orf98E9PRG8 122 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 M0R3H8 397 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 CHP2O43745 196 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 FMO6PO60774 539 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms