RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 KHDRBS3O75525 346 aaKnown RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 GLCEO94923 617 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CAPZA2P47755 286 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 GNG2P59768 71 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 LGALS3BPQ08380 585 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 ZNF74Q16587 644 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 LGALSLQ3ZCW2 172 aaPredicted RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 FAM198BQ6UWH4 519 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 BIVMQ86UB2 503 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CMIPQ8IY22 773 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 FAM71CQ8NEG0 241 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 DVL3Q92997 716 aaPredicted RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 PMEPA1Q969W9 287 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 KLHDC7BQ96G42 594 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 MAP6Q96JE9 813 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 OR11A1Q9GZK7 315 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CAMK2AQ9UQM7 478 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 NUBP2Q9Y5Y2 271 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CLDN4O14493 209 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 PPM1BO75688 479 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 UTS2O95399 124 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 OPN1LWP04000 364 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 PROS1P07225 676 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 DPP4P27487 766 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 CAPZBP47756 277 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 SKP2Q13309 424 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 MELKQ14680 651 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 STAC2Q6ZMT1 411 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 EXD3Q8N9H8 876 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 OR7G1Q8NGA0 311 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 C1orf216Q8TAB5 229 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 RPS4Y2Q8TD47 263 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 GPR119Q8TDV5 335 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 SMIM4Q8WVI0 70 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 CYYR1Q96J86 154 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 GPX7Q96SL4 187 aaPredicted RBP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 ZMAT3Q9HA38 289 aaKnown RBP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 ELF5Q9UKW6 265 aaPredicted RBP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 ASPMQ8IZT6 3477 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 A0A1W2PQ72 361 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 ZNF749O43361 778 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 SRPX2O60687 465 aaPredicted RBP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 UPK3AO75631 287 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 KDM4BO94953 1096 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 MPC2O95563 127 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 UBL4AP11441 157 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 CCR9P51686 369 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 PSMD4P55036 377 aaKnown RBP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 UBE2NLQ5JXB2 153 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 SLC35D3Q5M8T2 416 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 WDFY1Q8IWB7 410 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 DUSP15Q9H1R2 295 aaPredicted RBP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 MMP25Q9NPA2 562 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 GMEB2Q9UKD1 530 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 ATXN7L1Q9ULK2 861 aaPredicted RBP11.5□□□□□ -0.57
CLIC4-202ENST00000488683 HIF3AQ9Y2N7 669 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 ZNF281Q9Y2X9 895 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 PCDHGA5Q9Y5G8 931 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 FKBP7Q9Y680 259 aa11.5□□□□□ -0.57
CLIC4-202ENST00000488683 PTH2RP49190 550 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 CCR5P51681 352 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 NR0B1P51843 470 aaKnown RBP11.49□□□□□ -0.57
CLIC4-202ENST00000488683 PRPS1P60891 318 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 ZNF117Q03924 483 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 LINC00303Q3SY05 128 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 PRSS35Q8N3Z0 413 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 OR2T35Q8NGX2 323 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 OR8S1Q8NH09 359 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 HYLS1Q96M11 299 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 TRAF4Q9BUZ4 470 aaPredicted RBP11.49□□□□□ -0.57
CLIC4-202ENST00000488683 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 GRHPRQ9UBQ7 328 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 A0A1W2PPC4 97 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 CD1AP06126 327 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 OR3A3P47888 321 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 SLC37A1P57057 533 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 PITPNAQ00169 270 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 DMRTC1Q5HYR2 192 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 TMEM69Q5SWH9 247 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 FAM69BQ5VUD6 431 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 HACD4Q5VWC8 232 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 WBP2NLQ6ICG8 309 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 LANCL3Q6ZV70 420 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 NLRC3Q7RTR2 1065 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 OR51D1Q8NGF3 324 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 OR5AK2Q8NH90 309 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 TMEM106AQ96A25 262 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 TCTN2Q96GX1 697 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 C8orf33Q9H7E9 229 aaPredicted RBP11.49□□□□□ -0.57
CLIC4-202ENST00000488683 LAMP5Q9UJQ1 280 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 V9GY05 133 aa11.49□□□□□ -0.57
CLIC4-202ENST00000488683 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.48□□□□□ -0.57
CLIC4-202ENST00000488683 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.48□□□□□ -0.57
CLIC4-202ENST00000488683 G3V3Q6 166 aa11.48□□□□□ -0.57
CLIC4-202ENST00000488683 AIPO00170 330 aa11.48□□□□□ -0.57
CLIC4-202ENST00000488683 SCDO00767 359 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms