RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 SNRNP40Q96DI7 357 aaKnown RBP13.48□□□□□ -0.25
CTNS-206ENST00000488623 LRR1Q96L50 414 aa13.48□□□□□ -0.25
CTNS-206ENST00000488623 ZNF582Q96NG8 517 aaPredicted RBP13.48□□□□□ -0.25
CTNS-206ENST00000488623 NMNAT3Q96T66 252 aa13.48□□□□□ -0.25
CTNS-206ENST00000488623 SF3B5Q9BWJ5 86 aaKnown RBP13.48□□□□□ -0.25
CTNS-206ENST00000488623 HCAR1Q9BXC0 346 aa13.48□□□□□ -0.25
CTNS-206ENST00000488623 FN3KQ9H479 309 aa13.48□□□□□ -0.25
CTNS-206ENST00000488623 MED29Q9NX70 200 aa13.48□□□□□ -0.25
CTNS-206ENST00000488623 DNAJC27Q9NZQ0 273 aa13.48□□□□□ -0.25
CTNS-206ENST00000488623 ZNF462Q96JM2 2506 aa13.48□□□□□ -0.25
CTNS-206ENST00000488623 OR14I1A6ND48 311 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 OR6C68A6NDL8 312 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 ZNF716A6NP11 495 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 KDM4EB2RXH2 506 aaPredicted RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 ARHGEF9O43307 516 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 SMNDC1O75940 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTNS-206ENST00000488623 AQP8O94778 261 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 ACVR2AP27037 513 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 TDGF1P3P51864 188 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 BIDP55957 195 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 PON3Q15166 354 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 PRR30Q53SZ7 412 aaPredicted RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 RBM48Q5RL73 367 aaKnown RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 PLBD1Q6P4A8 553 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 LEG1Q6P5S2 330 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 CHMP1BQ7LBR1 199 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 CXXC5Q7LFL8 322 aaKnown RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 JAZF1Q86VZ6 243 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 GHDCQ8N2G8 530 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 BPIFB6Q8NFQ5 453 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 OR9K2Q8NGE7 335 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 FNDC9Q8TBE3 224 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 EMC6Q9BV81 110 aa13.47□□□□□ -0.25
CTNS-206ENST00000488623 YTHDF1Q9BYJ9 559 aaKnown RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 ING1Q9UK53 422 aaPredicted RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 MCTS1Q9ULC4 181 aaKnown RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 HELZ2Q9BYK8 2649 aaKnown RBP13.47□□□□□ -0.25
CTNS-206ENST00000488623 SH3D21A4FU49 640 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 SLC35F4A4IF30 521 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 CLCA1A8K7I4 914 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
CTNS-206ENST00000488623 H7C1C5 153 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 SLC1A7O00341 560 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 XPNPEP2O43895 674 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 TRMUO75648 421 aaKnown RBP13.46□□□□□ -0.25
CTNS-206ENST00000488623 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
CTNS-206ENST00000488623 ZNF3P17036 446 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.25
CTNS-206ENST00000488623 NUDT6P53370 316 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 CLDN17P56750 224 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 CXCR4P61073 352 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 LCN6P62502 163 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 RASGEF1BQ0VAM2 473 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 NFATC3Q12968 1075 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 EEF1A1P5Q5VTE0 462 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 MEDAGQ5VYS4 303 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 ADGRE4PQ86SQ3 457 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 PM20D2Q8IYS1 436 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 OR5M9Q8NGP3 310 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 ZNF566Q969W8 418 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 OTULINQ96BN8 352 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 ZNF775Q96BV0 537 aaPredicted RBP13.46□□□□□ -0.25
CTNS-206ENST00000488623 Q96MT0 163 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 ZNF385AQ96PM9 386 aaKnown RBP13.46□□□□□ -0.25
CTNS-206ENST00000488623 NMNAT2Q9BZQ4 307 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 AMBNQ9NP70 447 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 PLCXD1Q9NUJ7 323 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 ASF1BQ9NVP2 202 aa13.46□□□□□ -0.25
CTNS-206ENST00000488623 PRSS37A4D1T9 235 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 A6NIZ1 184 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 AHRRA9YTQ3 701 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 XKRYO14609 159 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 TGM6O95932 706 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 LYNP07948 512 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 CCDC159P0C7I6 412 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 CLUP10909 449 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 SLC2A5P22732 501 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 CRHBPP24387 322 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 NTF4P34130 210 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 PTGS2P35354 604 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 SLC16A1P53985 500 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 RAP1BP61224 184 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 RAP1AP62834 184 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 CSNK2BP67870 215 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 NXNL2Q5VZ03 156 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 OR9Q1Q8NGQ5 310 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 OR6X1Q8NH79 312 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 RNF128Q8TEB7 428 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 ABHD3Q8WU67 409 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 ZNRF4Q8WWF5 429 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 SGCDQ92629 289 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 GGHQ92820 318 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 SNX18Q96RF0 628 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 SLX1AQ9BQ83 275 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 PRRG4Q9BZD6 226 aa13.45□□□□□ -0.26
CTNS-206ENST00000488623 VSX1Q9NZR4 365 aaPredicted RBP13.45□□□□□ -0.26
CTNS-206ENST00000488623 H2AFY2Q9P0M6 372 aaPredicted RBP13.45□□□□□ -0.26
CTNS-206ENST00000488623 MYRFQ9Y2G1 1151 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms