RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ERVV-1B6SEH8 477 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 CCL21O00585 134 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 SUPT3HO75486 399 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 ERLIN2O94905 339 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 CSF3P09919 207 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 GKN3PP0CG01 181 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 PNMA6AP0CW24 399 aaPredicted RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 TCN1P20061 433 aaPredicted RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 HOXA9P31269 272 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 CASP14P31944 242 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 RORAP35398 523 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 HSD17B2P37059 387 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 SSR1P43307 286 aaKnown RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 GPR6P46095 362 aaPredicted RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 FGF8P55075 233 aaPredicted RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 CDH4P55283 916 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 TMEM183BQ1AE95 376 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 ZBED5Q49AG3 693 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 KCTD21Q4G0X4 260 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 AGBL2Q5U5Z8 902 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 LRRC74BQ6ZQY2 392 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 C6orf120Q7Z4R8 191 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 TGIF2LXQ8IUE1 241 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 PSTKQ8IV42 348 aaKnown RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 TMEM183AQ8IXX5 376 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 UBE2J2Q8N2K1 259 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 DUSP18Q8NEJ0 188 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 VN1R2Q8NFZ6 395 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 OR10G9Q8NGN4 311 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 OR1N2Q8NGR9 330 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 OR13C2Q8NGS9 318 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 SLC22A8Q8TCC7 542 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 SDR42E1Q8WUS8 393 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 SHC3Q92529 594 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 SGK3Q96BR1 496 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 LRRC58Q96CX6 371 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 IFT74Q96LB3 600 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 HSFY1Q96LI6 401 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 MFFQ9GZY8 342 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 CDC42EP4Q9H3Q1 356 aaKnown RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 MRPL47Q9HD33 250 aaKnown RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 DMAP1Q9NPF5 467 aaPredicted RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 STOX2Q9P2F5 926 aaPredicted RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 PCYOX1Q9UHG3 505 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 F11RQ9Y624 299 aaKnown RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 CDHR2Q9BYE9 1310 aa2.05□□□□□ -2.08
CD46-215ENST00000488596 MTCL1Q9Y4B5 1905 aaKnown RBP2.05□□□□□ -2.08
CD46-215ENST00000488596 IGHV3-64DA0A0J9YX35 117 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 A0A1B0GVI7 797 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 FAM240BA0A1B0GVZ2 78 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 A0A1W2PPE3 182 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 CIB4A0PJX0 185 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 SLC31A2O15432 143 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 PSTPIP1O43586 416 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 CD5LO43866 347 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 MGRN1O60291 552 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 SS18L1O75177 396 aaPredicted RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 FGF1P05230 155 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 CT62P0C5K7 136 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 NCF2P19878 526 aaPredicted RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 KITLGP21583 273 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 HNRNPH3P31942 346 aaKnown RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 RPL23AP62750 156 aaKnown RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 RPS21P63220 83 aaKnown RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 HMGN5P82970 282 aaKnown RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 DDX39BQ13838 428 aaKnown RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 KANK1Q14678 1352 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 SGCAQ16586 387 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 RABL6Q3YEC7 729 aaPredicted RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 PIGGQ5H8A4 983 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 CTSL3PQ5NE16 218 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 PRAMEF5Q5TYX0 476 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 KHDRBS2Q5VWX1 349 aaKnown RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 PRAMEF6Q5VXH4 476 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 LHFPL3Q86UP9 236 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 SLC22A9Q8IVM8 553 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 ZNF557Q8N988 423 aaPredicted RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 HSD17B11Q8NBQ5 300 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 CEMIPQ8WUJ3 1361 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 GIMAP1Q8WWP7 306 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 TUBGCP3Q96CW5 907 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 CEP170P1Q96L14 293 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 RANBP3Q9H6Z4 567 aaPredicted RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 METTL7AQ9H8H3 244 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 UGT1A7Q9HAW7 530 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 UGT1A10Q9HAW8 530 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 UGT1A8Q9HAW9 530 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 NT5MQ9NPB1 228 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 EXD2Q9NVH0 621 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 KLHL28Q9NXS3 571 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 ZNF226Q9NYT6 803 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 RBAKQ9NYW8 714 aaPredicted RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 ZNFX1Q9P2E3 1918 aaKnown RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 KLK12Q9UKR0 248 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 HPCAL4Q9UM19 191 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 PACSIN2Q9UNF0 486 aaPredicted RBP2.04□□□□□ -2.08
CD46-215ENST00000488596 N6AMT1Q9Y5N5 214 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 PEX16Q9Y5Y5 336 aa2.04□□□□□ -2.08
CD46-215ENST00000488596 SCN2AQ99250 2005 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 NFASCO94856 1347 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms