RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SLC25A15Q9Y619 301 aa13.22□□□□□ -0.29
CXCL12-207ENST00000488591 ANKRD17O75179 2603 aaKnown RBP13.21□□□□□ -0.29
CXCL12-207ENST00000488591 CLOCKO15516 846 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 ATP5HO75947 161 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-207ENST00000488591 MAKP20794 623 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 FUT4P22083 530 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 DNASE1P24855 282 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 CSNK1A1P48729 337 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 UBE2NP61088 152 aaKnown RBP13.21□□□□□ -0.29
CXCL12-207ENST00000488591 LSM11P83369 360 aaKnown RBP eCLIP13.21□□□□□ -0.29
CXCL12-207ENST00000488591 MS4A2Q01362 244 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 SPIBQ01892 262 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 CHRNB3Q05901 458 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 TRAP1Q12931 704 aaKnown RBP13.21□□□□□ -0.29
CXCL12-207ENST00000488591 LAPTM4AQ15012 233 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 CEACAM16Q2WEN9 425 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 FAM98BQ52LJ0 330 aaKnown RBP13.21□□□□□ -0.29
CXCL12-207ENST00000488591 ALG10Q5BKT4 473 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 NCMAPQ5T1S8 102 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 ZNF704Q6ZNC4 412 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-207ENST00000488591 TMPRSS11FQ6ZWK6 438 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 LINGO2Q7L985 606 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 WDR31Q8NA23 367 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 OR52J3Q8NH60 311 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 OR51A7Q8NH64 312 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 NRGNQ92686 78 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 NINJ1Q92982 152 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 ULBP2Q9BZM5 246 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 MAGIXQ9H6Y5 334 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 ST6GALNAC2Q9UJ37 374 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 TMCC3Q9ULS5 477 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 AURKCQ9UQB9 309 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 POFUT2Q9Y2G5 429 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 HIF3AQ9Y2N7 669 aa13.21□□□□□ -0.29
CXCL12-207ENST00000488591 ABCA4P78363 2273 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 A0A1W2PR80 420 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 DNAJC8O75937 253 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-207ENST00000488591 IGHG1P01857 330 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 RAF1P04049 648 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 TSPAN19P0C672 248 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 PTAFRP25105 342 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 LOXP28300 417 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-207ENST00000488591 ZNF83P51522 516 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 ARF1P84077 181 aaKnown RBP13.2□□□□□ -0.3
CXCL12-207ENST00000488591 BNIP1Q12981 228 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 KEAP1Q14145 624 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 MELKQ14680 651 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 TBRG1Q3YBR2 411 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 IQCCQ4KMZ1 466 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 HIKESHIQ53FT3 197 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 TMEM108Q6UXF1 575 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 PIWIL3Q7Z3Z3 882 aaKnown RBP13.2□□□□□ -0.3
CXCL12-207ENST00000488591 MOSPD2Q8NHP6 518 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-207ENST00000488591 BCL2L2Q92843 193 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-207ENST00000488591 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-207ENST00000488591 DHRS1Q96LJ7 313 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 LIME1Q9H400 295 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 UBTD1Q9HAC8 227 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 MOV10Q9HCE1 1003 aaKnown RBP13.2□□□□□ -0.3
CXCL12-207ENST00000488591 GLTPQ9NZD2 209 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 RNF115Q9Y4L5 304 aa13.2□□□□□ -0.3
CXCL12-207ENST00000488591 PDZD2O15018 2839 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 POLQO75417 2590 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 A0A096LPE4 126 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 A0A1W2PPR1 153 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 A0A1W2PPZ6 126 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 TCRBV5S2A0A599 114 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 DPRXA6NFQ7 191 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 NPIPB13A6NJU9 1138 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 ZNF99A8MXY4 864 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-207ENST00000488591 CENPBD1B2RD01 187 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 NPIPB4C9JG80 1138 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 M0R1B8 84 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 KRT36O76013 467 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 RRM2P31350 389 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 IFNGR2P38484 337 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 GPR4P46093 362 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 CLRN1P58418 232 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 RPS4XP62701 263 aaKnown RBP13.19□□□□□ -0.3
CXCL12-207ENST00000488591 BSPH1Q075Z2 132 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 ACKR1Q16570 336 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 ZBED5Q49AG3 693 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 PHYHD1Q5SRE7 291 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 SEZ6L2Q6UXD5 910 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 PAMR1Q6UXH9 720 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 MEX3DQ86XN8 651 aaKnown RBP13.19□□□□□ -0.3
CXCL12-207ENST00000488591 CCDC36Q8IYA8 594 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 DEPDC4Q8N2C3 294 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 OR4K5Q8NGD3 323 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 TMEM54Q969K7 222 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
CXCL12-207ENST00000488591 RADILQ96JH8 1075 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 ALPK1Q96QP1 1244 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 TNFRSF13CQ96RJ3 184 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 TMEM204Q9BSN7 226 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 C1QTNF6Q9BXI9 259 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms