RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 LIPEQ05469 1076 aa15.45■□□□□ 0.06
ITGB1-215ENST00000488494 PIN1Q13526 163 aaPredicted RBP15.45■□□□□ 0.06
ITGB1-215ENST00000488494 MELKQ14680 651 aa15.45■□□□□ 0.06
ITGB1-215ENST00000488494 MYPOPQ86VE0 399 aaPredicted RBP15.45■□□□□ 0.06
ITGB1-215ENST00000488494 NKAIN4Q8IVV8 208 aa15.45■□□□□ 0.06
ITGB1-215ENST00000488494 POM121Q96HA1 1249 aa15.45■□□□□ 0.06
ITGB1-215ENST00000488494 ADAD1Q96M93 576 aaKnown RBP15.45■□□□□ 0.06
ITGB1-215ENST00000488494 ELAC2Q9BQ52 826 aaKnown RBP15.45■□□□□ 0.06
ITGB1-215ENST00000488494 POLR2J2Q9GZM3 115 aaKnown RBP15.45■□□□□ 0.06
ITGB1-215ENST00000488494 POLR2J3Q9H1A7 115 aaKnown RBP15.45■□□□□ 0.06
ITGB1-215ENST00000488494 MOV10Q9HCE1 1003 aaKnown RBP15.45■□□□□ 0.06
ITGB1-215ENST00000488494 NME4O00746 187 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 RNF13O43567 381 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 IGKV3-15P01624 115 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 CRYAAP02489 173 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 HIST1H2ABP04908 130 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 ASAH2BP0C7U1 165 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 HOXB1P14653 301 aaPredicted RBP15.44■□□□□ 0.06
ITGB1-215ENST00000488494 B4GALT1P15291 398 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 PAX7P23759 505 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 RBM34P42696 430 aaKnown RBP15.44■□□□□ 0.06
ITGB1-215ENST00000488494 CSNK1A1P48729 337 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 IDH3GP51553 393 aaPredicted RBP15.44■□□□□ 0.06
ITGB1-215ENST00000488494 NPRL3Q12980 569 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 SLC35D2Q76EJ3 337 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 HIST3H2AQ7L7L0 130 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 MDP1Q86V88 176 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 SLC15A3Q8IY34 581 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 HTRA1Q92743 480 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 HIST1H2ACQ93077 130 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 LRR1Q96L50 414 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 TAS2R5Q9NYW4 299 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 RIMS3Q9UJD0 308 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 AP3M1Q9Y2T2 418 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 NAV3Q8IVL0 2385 aa15.44■□□□□ 0.06
ITGB1-215ENST00000488494 RNF223E7ERA6 249 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 SSX4O60224 188 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 HOXB4P17483 251 aaPredicted RBP15.43■□□□□ 0.06
ITGB1-215ENST00000488494 CALCRP30988 508 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 NUDT6P53370 316 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 C3orf36Q3SXR2 165 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 ZNF813Q6ZN06 617 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 FAM169BQ8N8A8 192 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 TMEM239Q8WW34 195 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 C20orf141Q9NUB4 165 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 POFUT2Q9Y2G5 429 aa15.43■□□□□ 0.06
ITGB1-215ENST00000488494 TLN2Q9Y4G6 2542 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 H7C417 338 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 GSTA4O15217 222 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 PIP5K1CO60331 668 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 OR7A10O76100 309 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 ZNF682O95780 498 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 HLA-HP01893 362 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 MT-ND1P03886 318 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 CBR1P16152 277 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 APOBEC3AP31941 199 aaPredicted RBP15.42■□□□□ 0.06
ITGB1-215ENST00000488494 ZP4Q12836 540 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 C8orf82Q6P1X6 216 aaPredicted RBP15.42■□□□□ 0.06
ITGB1-215ENST00000488494 VHLLQ6RSH7 139 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 VTCN1Q7Z7D3 282 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 CCDC36Q8IYA8 594 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 MAPK1IP1LQ8NDC0 245 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 OR6X1Q8NH79 312 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 LZICQ8WZA0 190 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 FBXO17Q96EF6 278 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 SGTBQ96EQ0 304 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 PRRC1Q96M27 445 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 FOXB1Q99853 325 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 NSRP1Q9H0G5 558 aaKnown RBP15.42■□□□□ 0.06
ITGB1-215ENST00000488494 EFCAB1Q9HAE3 211 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 NOX3Q9HBY0 568 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 CA10Q9NS85 328 aa15.42■□□□□ 0.06
ITGB1-215ENST00000488494 BLOC1S5-TXNDC5H3BN57 136 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 CXCR6O00574 342 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 THRBP10828 461 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 CD79AP11912 226 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 ARR3P36575 388 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 GSK3BP49841 420 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 SELENOWP63302 87 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 CHRNB3Q05901 458 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 RPL18Q07020 188 aaKnown RBP15.41■□□□□ 0.06
ITGB1-215ENST00000488494 HACD2Q6Y1H2 254 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 DNM1P46Q6ZS02 220 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 ZNF627Q7L945 461 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 TMEM54Q969K7 222 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 ZNF566Q969W8 418 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 SLC25A44Q96H78 314 aaPredicted RBP15.41■□□□□ 0.06
ITGB1-215ENST00000488494 HOPXQ9BPY8 73 aaPredicted RBP15.41■□□□□ 0.06
ITGB1-215ENST00000488494 MYLK2Q9H1R3 596 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 GLTPQ9NZD2 209 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 MED31Q9Y3C7 131 aa15.41■□□□□ 0.06
ITGB1-215ENST00000488494 IGHV2OR16-5A0A0B4J2B6 119 aa15.4■□□□□ 0.06
ITGB1-215ENST00000488494 IFNW1P05000 195 aa15.4■□□□□ 0.06
ITGB1-215ENST00000488494 F13BP05160 661 aa15.4■□□□□ 0.06
ITGB1-215ENST00000488494 PGA4P0DJD7 388 aa15.4■□□□□ 0.06
ITGB1-215ENST00000488494 PGA3P0DJD8 388 aa15.4■□□□□ 0.06
ITGB1-215ENST00000488494 DRD4P21917 467 aa15.4■□□□□ 0.06
ITGB1-215ENST00000488494 LSP1P33241 339 aa15.4■□□□□ 0.06
ITGB1-215ENST00000488494 YAP1P46937 504 aaKnown RBP15.4■□□□□ 0.06
ITGB1-215ENST00000488494 SNRPD2P62316 118 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms