RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 AHCYP23526 432 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 CDH12P55289 794 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 RGS8P57771 180 aaPredicted RBP13.22□□□□□ -0.29
TRIM50-203ENST00000488217 SNTB2Q13425 540 aaKnown RBP13.22□□□□□ -0.29
TRIM50-203ENST00000488217 GSG1Q2KHT4 349 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 CR1LQ2VPA4 569 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 LIPNQ5VXI9 398 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 KRT80Q6KB66 452 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 LINC00114Q6XXX2 140 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 ZNF813Q6ZN06 617 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 SNX32Q86XE0 403 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 ARMC8Q8IUR7 673 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 OR6N1Q8NGY5 312 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 MOGAT1Q96PD6 335 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 EBF4Q9BQW3 602 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 C19orf24Q9BVV8 132 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 MS4A5Q9H3V2 200 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 IKZF5Q9H5V7 419 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 DENND2DQ9H6A0 471 aaPredicted RBP13.22□□□□□ -0.29
TRIM50-203ENST00000488217 EVA1AQ9H8M9 152 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 DYNLRB1Q9NP97 96 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 MED29Q9NX70 200 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 REV1Q9UBZ9 1251 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 TESQ9UGI8 421 aaKnown RBP13.22□□□□□ -0.29
TRIM50-203ENST00000488217 CORO2BQ9UQ03 480 aa13.22□□□□□ -0.29
TRIM50-203ENST00000488217 TRBV5-3A0A0A0MS03 114 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 IFNGR1P15260 489 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 AQP1P29972 269 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 GLRXP35754 106 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 NCALDP61601 193 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 RAB1AP62820 205 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 SRSF2Q01130 221 aaKnown RBP13.21□□□□□ -0.29
TRIM50-203ENST00000488217 POU3F1Q03052 451 aaPredicted RBP13.21□□□□□ -0.29
TRIM50-203ENST00000488217 CAMK2DQ13557 499 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 RIN1Q13671 783 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 TRMT5Q32P41 509 aaKnown RBP13.21□□□□□ -0.29
TRIM50-203ENST00000488217 AGKQ53H12 422 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 UGT2A3Q6UWM9 527 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 DLEU7Q6UYE1 221 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 CDK20Q8IZL9 346 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 LINC01356Q8N9X3 169 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 HIPK4Q8NE63 616 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 LRRC8CQ8TDW0 803 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 ZNF75AQ96N20 296 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 TMEM43Q9BTV4 400 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 SLCO1B3Q9NPD5 702 aa13.21□□□□□ -0.29
TRIM50-203ENST00000488217 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.29
TRIM50-203ENST00000488217 TMEFF2Q9UIK5 374 aaPredicted RBP13.21□□□□□ -0.29
TRIM50-203ENST00000488217 LRRN3E7EW58 273 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 LYNX1G3V0Z9 82 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 M0QX08 132 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 ATP8B1O43520 1251 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 SYNGR3O43761 229 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 OR6A2O95222 327 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 LYNX1P0DP58 116 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 ZNF14P17017 642 aaPredicted RBP13.2□□□□□ -0.3
TRIM50-203ENST00000488217 APEX1P27695 318 aaKnown RBP13.2□□□□□ -0.3
TRIM50-203ENST00000488217 IL2RGP31785 369 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 PUDPQ08623 228 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 DUSP7Q16829 419 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 RUNDC3AQ59EK9 446 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 TTMPQ5BVD1 217 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
TRIM50-203ENST00000488217 RANBP3LQ86VV4 465 aaPredicted RBP13.2□□□□□ -0.3
TRIM50-203ENST00000488217 WDFY1Q8IWB7 410 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 SMYD1Q8NB12 490 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 MRPL24Q96A35 216 aaKnown RBP13.2□□□□□ -0.3
TRIM50-203ENST00000488217 C1orf159Q96HA4 380 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 SNX18Q96RF0 628 aa13.2□□□□□ -0.3
TRIM50-203ENST00000488217 MRPL37Q9BZE1 423 aaKnown RBP13.2□□□□□ -0.3
TRIM50-203ENST00000488217 FMO6PO60774 539 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 MT-ATP6P00846 226 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 C8BP07358 591 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 COL8A2P25067 703 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 GIPRP48546 466 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 PTDSS1P48651 473 aaKnown RBP13.19□□□□□ -0.3
TRIM50-203ENST00000488217 ATP4BP51164 291 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 MSMPQ1L6U9 139 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 GKAP1Q5VSY0 366 aaPredicted RBP13.19□□□□□ -0.3
TRIM50-203ENST00000488217 ZNF613Q6PF04 617 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 PIWIL3Q7Z3Z3 882 aaKnown RBP13.19□□□□□ -0.3
TRIM50-203ENST00000488217 SKA3Q8IX90 412 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 OR5J2Q8NH18 312 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 MCHR1Q99705 422 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 ULBP2Q9BZM5 246 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 TPK1Q9H3S4 243 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
TRIM50-203ENST00000488217 SERPINI2O75830 405 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 RAB36O95755 333 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 SERPINA5P05154 406 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 ADORA3P0DMS8 318 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 B4GALT1P15291 398 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 TCN1P20061 433 aaPredicted RBP13.18□□□□□ -0.3
TRIM50-203ENST00000488217 CSNK1A1P48729 337 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 BIDP55957 195 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 GALK2Q01415 458 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 ZP4Q12836 540 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms