RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NPTNQ9Y639 398 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 TRBV5-5A0A0J9YX44 114 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 ACOD1A6NK06 481 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 TSPAN2O60636 221 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 PRAF2O60831 178 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 ICOSLGO75144 302 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 ABHD16AO95870 558 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 ATXN8OSP0DMR3 200 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 ALKBH1Q13686 389 aaKnown RBP23.68■■□□□ 1.38
HLA-C-208ENST00000487245 ST3GAL2Q16842 350 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 Q499Y3 187 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 HES5Q5TA89 166 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 NANOGNBQ7Z5D8 188 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 CDC20BQ86Y33 519 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 TIGD4Q8IY51 512 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 LSM14AQ8ND56 463 aaKnown RBP23.68■■□□□ 1.38
HLA-C-208ENST00000487245 GRHPRQ9UBQ7 328 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 WNT16Q9UBV4 365 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 SLC23A1Q9UHI7 598 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 GON4LQ3T8J9 2241 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 IDSB3KWA1 339 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 ADRB1P08588 477 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 MST1P26927 711 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 CFHR1Q03591 330 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 LTBQ06643 244 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 NSDHLQ15738 373 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 SLC29A4Q7RTT9 530 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 C15orf40Q8WUR7 153 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 GIMAP1Q8WWP7 306 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 LPAR4Q99677 370 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 DPYSL5Q9BPU6 564 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 SLC25A18Q9H1K4 315 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 KLHL9Q9P2J3 617 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 MRM2Q9UI43 246 aaKnown RBP23.68■■□□□ 1.38
HLA-C-208ENST00000487245 ELF5Q9UKW6 265 aaPredicted RBP23.68■■□□□ 1.38
HLA-C-208ENST00000487245 MGAT4AQ9UM21 535 aa23.68■■□□□ 1.38
HLA-C-208ENST00000487245 COL5A1P20908 1838 aaPredicted RBP23.67■■□□□ 1.38
HLA-C-208ENST00000487245 A0A1B0GX78 115 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 HSPB2A8KAH6 182 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 ALG1L2C9J202 215 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 GPR171O14626 319 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 KHNYNO15037 678 aaKnown RBP23.67■■□□□ 1.38
HLA-C-208ENST00000487245 CDC40O60508 579 aaKnown RBP eCLIP23.67■■□□□ 1.38
HLA-C-208ENST00000487245 PEX14O75381 377 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 KRT33AO76009 404 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 ZNF432O94892 652 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 CXCR1P25024 350 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 AFF3P51826 1226 aaKnown RBP23.67■■□□□ 1.38
HLA-C-208ENST00000487245 ZNF117Q03924 483 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 HSPB2Q16082 182 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 ARHGAP40Q5TG30 622 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 LINGO2Q7L985 606 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 ZNF511Q8NB15 262 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 SLITRK2Q9H156 845 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 IRF2BPLQ9H1B7 796 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 HRASLSQ9HDD0 168 aa23.67■■□□□ 1.38
HLA-C-208ENST00000487245 A0A1B0GVT2 93 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 BCAT2O15382 392 aaPredicted RBP23.66■■□□□ 1.38
HLA-C-208ENST00000487245 TPOP07202 933 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 FOLR1P15328 257 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 CXCL3P19876 107 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 PGCP20142 388 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 NR0B1P51843 470 aaKnown RBP23.66■■□□□ 1.38
HLA-C-208ENST00000487245 PNLIPRP2P54317 469 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 PER3P56645 1201 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 SCAND1P57086 179 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 RPL18Q07020 188 aaKnown RBP23.66■■□□□ 1.38
HLA-C-208ENST00000487245 ZBTB37Q5TC79 503 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 OLFML2AQ68BL7 652 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 PWWP2BQ6NUJ5 590 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 WDR74Q6RFH5 385 aaPredicted RBP23.66■■□□□ 1.38
HLA-C-208ENST00000487245 C9orf40Q8IXQ3 194 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 IZUMO1Q8IYV9 350 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 PRR22Q8IZ63 422 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 OR1N1Q8NGS0 311 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 OR2T4Q8NH00 348 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 NSMAFQ92636 917 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 KTI12Q96EK9 354 aaPredicted RBP23.66■■□□□ 1.38
HLA-C-208ENST00000487245 ADAD1Q96M93 576 aaKnown RBP23.66■■□□□ 1.38
HLA-C-208ENST00000487245 WWTR1Q9GZV5 400 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 C20orf85Q9H1P6 137 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 FOXJ3Q9UPW0 622 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 ARPC4-TTLL3A0A0A6YYG9 625 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 HCRTR2O43614 444 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 NDUFB5O43674 189 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 TGM6O95932 706 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 RENP00797 406 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 ZP2Q05996 745 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 RIPPLY1Q0D2K3 151 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 PLCXD2Q0VAA5 305 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 WDR45BQ5MNZ6 344 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 SEZ6L2Q6UXD5 910 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 STAC2Q6ZMT1 411 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 FCRLAQ7L513 359 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 S100A16Q96FQ6 103 aaKnown RBP23.66■■□□□ 1.38
HLA-C-208ENST00000487245 KLHDC2Q9Y2U9 406 aa23.66■■□□□ 1.38
HLA-C-208ENST00000487245 TRAV36DV7A0A075B6V5 113 aa23.65■■□□□ 1.38
HLA-C-208ENST00000487245 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.65■■□□□ 1.38
HLA-C-208ENST00000487245 TMEM72A0PK05 275 aa23.65■■□□□ 1.38
HLA-C-208ENST00000487245 LDOC1O95751 146 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms