RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 WDR76Q9H967 626 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 WIF1Q9Y5W5 379 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 FKBP7Q9Y680 259 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 RALGAPA1Q6GYQ0 2036 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 A0A1W2PQ09 198 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 PRSS37A4D1T9 235 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 GALR2O43603 387 aaPredicted RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 PLGP00747 810 aaPredicted RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 PSMB10P40306 273 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 RPS11P62280 158 aaKnown RBP eCLIP18.37■□□□□ 0.53
HPS3-206ENST00000486530 BICRALQ6AI39 1079 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 FAM199XQ6PEV8 388 aaPredicted RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 CCBE1Q6UXH8 406 aaPredicted RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 OR10G3Q8NGC4 313 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 PHYHIPQ92561 330 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 DDIT4LQ96D03 193 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 SPACA9Q96E40 222 aaPredicted RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 ADAD1Q96M93 576 aaKnown RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 KLHL15Q96M94 604 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 INTS14Q96SY0 518 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 TMEM14AQ9Y6G1 99 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 COL27A1Q8IZC6 1860 aaPredicted RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 TVP23AA6NH52 213 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 PRR32B1ATL7 298 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 BOLA2-SMG1P6H3BVE0 249 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 PHYHO14832 338 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 FLRT2O43155 660 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 CSF3P09919 207 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 UCHL1P09936 223 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 RAB3BP20337 219 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 PTGDSP41222 190 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 CENPAP49450 140 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 ZNF41P51814 821 aaPredicted RBP18.36■□□□□ 0.53
HPS3-206ENST00000486530 MAP2K6P52564 334 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 FOXF1Q12946 379 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 RIN1Q13671 783 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 BTBD16Q32M84 506 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 ARSKQ6UWY0 536 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 SCAIQ8N9R8 606 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 OR6N2Q8NGY6 317 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 MFSD8Q8NHS3 518 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 RASL10BQ96S79 203 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 VSX1Q9NZR4 365 aaPredicted RBP18.36■□□□□ 0.53
HPS3-206ENST00000486530 LAMP5Q9UJQ1 280 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 VDAC3Q9Y277 283 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 KLHDC2Q9Y2U9 406 aa18.36■□□□□ 0.53
HPS3-206ENST00000486530 A0A0G2JK05 382 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 SEC14L5O43304 696 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 BLVRAP53004 296 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 SLC25A53Q5H9E4 307 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 MRGPRX4Q96LA9 322 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 NPAS1Q99742 590 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 PDCD1LG2Q9BQ51 273 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 MFRPQ9BY79 579 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 PPP1R3EQ9H7J1 279 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 PTRH2Q9Y3E5 179 aaKnown RBP18.35■□□□□ 0.53
HPS3-206ENST00000486530 IGHV1-45A0A0A0MS14 117 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 CDX4O14627 284 aaPredicted RBP18.35■□□□□ 0.53
HPS3-206ENST00000486530 DKK1O94907 266 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 AKR7A3O95154 331 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 KRT8P05787 483 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 UMODP07911 640 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 THBS2P35442 1172 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 OR10A3P58181 314 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 EGR3Q06889 387 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 ZP4Q12836 540 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 ASAH1Q13510 395 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 EXT1Q16394 746 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 YIF1BQ5BJH7 314 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 ZNF517Q6ZMY9 492 aaPredicted RBP18.35■□□□□ 0.53
HPS3-206ENST00000486530 ZNF248Q8NDW4 579 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 NXPE2Q96DL1 559 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 UBL7Q96S82 380 aaPredicted RBP18.35■□□□□ 0.53
HPS3-206ENST00000486530 ZNF700Q9H0M5 742 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 SLC39A1Q9NY26 324 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 MRM2Q9UI43 246 aaKnown RBP18.35■□□□□ 0.53
HPS3-206ENST00000486530 B9D1Q9UPM9 204 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 RASD1Q9Y272 281 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 ZNF281Q9Y2X9 895 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 B3GALT1Q9Y5Z6 326 aa18.35■□□□□ 0.53
HPS3-206ENST00000486530 GPR179Q6PRD1 2367 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 HSPB2A8KAH6 182 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 FAM25AB3EWG3 89 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 FAM25CB3EWG5 89 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 FAM25GB3EWG6 89 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 PSMD9O00233 223 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 ABHD16AO95870 558 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 OR8G3PP0DMU2 310 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 CD59P13987 128 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 PUDPQ08623 228 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 IL18Q14116 193 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 HSPB2Q16082 182 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 UNQ9370/PRO34162Q6UXP9 181 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 LRRC28Q86X40 367 aaPredicted RBP18.34■□□□□ 0.53
HPS3-206ENST00000486530 YIPF7Q8N8F6 280 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 OR14A2Q96R54 314 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 WDR87Q6ZQQ6 2873 aa18.34■□□□□ 0.53
HPS3-206ENST00000486530 ZNF879B4DU55 563 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 B4E171 279 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 KLF7O75840 302 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms