RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SLC7A2P52569 658 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 GYS2P54840 703 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 RAB35Q15286 201 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 ZNF813Q6ZN06 617 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 NANOGNBQ7Z5D8 188 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 CPLX4Q7Z7G2 160 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 PCDHAC1Q9H158 963 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 MEPEQ9NQ76 525 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-204ENST00000486023 RHCGQ9UBD6 479 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 ARPC4-TTLL3A0A0A6YYG9 625 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 FAM171A2A8MVW0 826 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 ZNF99A8MXY4 864 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-204ENST00000486023 CXCR6O00574 342 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 OR5F1O95221 314 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 HLA-HP01893 362 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 CECR9P0C854 216 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 NUDT6P53370 316 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 UGT2B15P54855 530 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 SELENOWP63302 87 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 ZNF544Q6NX49 715 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 VTCN1Q7Z7D3 282 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 MDP1Q86V88 176 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 ANKK1Q8NFD2 765 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 MAGEE2Q8TD90 523 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-204ENST00000486023 TMEM239Q8WW34 195 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 LZICQ8WZA0 190 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 SGTBQ96EQ0 304 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 HOPXQ9BPY8 73 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-204ENST00000486023 ZNF229Q9UJW7 825 aa15.37■□□□□ 0.05
COL6A1-204ENST00000486023 ZNF503-AS2A6NEH8 195 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 NME4O00746 187 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 MT-ND1P03886 318 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 F13BP05160 661 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 HEXAP06865 529 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 BMP4P12644 408 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 HOXB1P14653 301 aaPredicted RBP15.36■□□□□ 0.05
COL6A1-204ENST00000486023 B4GALT1P15291 398 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 NCK1P16333 377 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 CALCRP30988 508 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 CHRNB3Q05901 458 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 FKBP9P1Q75LS8 142 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 ARPINQ7Z6K5 226 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 BOD1Q96IK1 185 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 LRR1Q96L50 414 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 SLC19A3Q9BZV2 496 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 BARX1Q9HBU1 254 aaPredicted RBP15.36■□□□□ 0.05
COL6A1-204ENST00000486023 C20orf141Q9NUB4 165 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 AP3M1Q9Y2T2 418 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 MED31Q9Y3C7 131 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 PMF1-BGLAPU3KQ54 211 aa15.36■□□□□ 0.05
COL6A1-204ENST00000486023 MCIDASD6RGH6 385 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 PIP5K1CO60331 668 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 BCL10O95999 233 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 ASAH2BP0C7U1 165 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 CBR1P16152 277 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 PCSK6P29122 969 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 IFNA8P32881 189 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 GSK3BP49841 420 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 NAAAQ02083 359 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 ETFDHQ16134 617 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 C11orf71Q6IPW1 123 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 NHLRC1Q6VVB1 395 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 SLC46A3Q7Z3Q1 461 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 MYPOPQ86VE0 399 aaPredicted RBP15.35■□□□□ 0.05
COL6A1-204ENST00000486023 MEX3DQ86XN8 651 aaKnown RBP15.35■□□□□ 0.05
COL6A1-204ENST00000486023 ZNF566Q969W8 418 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 FAM162AQ96A26 154 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 KCTD14Q9BQ13 255 aaPredicted RBP15.35■□□□□ 0.05
COL6A1-204ENST00000486023 ZNF426Q9BUY5 554 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 KATNB1Q9BVA0 655 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 REG4Q9BYZ8 158 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 NSRP1Q9H0G5 558 aaKnown RBP15.35■□□□□ 0.05
COL6A1-204ENST00000486023 CA10Q9NS85 328 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 GLTPQ9NZD2 209 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 SNX13Q9Y5W8 968 aa15.35■□□□□ 0.05
COL6A1-204ENST00000486023 A0A1W2PRG6 482 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 J3KTA2 159 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 OR7A10O76100 309 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 LY6HO94772 140 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 SERPINA1P01009 418 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 IFNW1P05000 195 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 OR4A8P0C604 315 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 PATE4P0C8F1 98 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 ARR3P36575 388 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 SERPINF1P36955 418 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 AQP2P41181 271 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 RBM34P42696 430 aaKnown RBP15.34■□□□□ 0.05
COL6A1-204ENST00000486023 PTDSS1P48651 473 aaKnown RBP15.34■□□□□ 0.05
COL6A1-204ENST00000486023 CLRN1P58418 232 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 PSME3P61289 254 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 MYBPC1Q00872 1141 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 RPL18Q07020 188 aaKnown RBP15.34■□□□□ 0.05
COL6A1-204ENST00000486023 ST3GAL3Q11203 375 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 ZP4Q12836 540 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 LAPTM4AQ15012 233 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 C1QTNF12Q5T7M4 302 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 SYT14Q8NB59 555 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 OR6X1Q8NH79 312 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 CMTM5Q96DZ9 223 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 FOXB1Q99853 325 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 509.6 ms