RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 UBE2J2Q8N2K1 259 aa17.59■□□□□ 0.41
COL6A2-208ENST00000485591 KATNB1Q9BVA0 655 aa17.59■□□□□ 0.41
COL6A2-208ENST00000485591 POLDIP3Q9BY77 421 aaKnown RBP17.59■□□□□ 0.41
COL6A2-208ENST00000485591 ENKD1Q9H0I2 346 aa17.59■□□□□ 0.41
COL6A2-208ENST00000485591 GABARAPL1Q9H0R8 117 aa17.59■□□□□ 0.41
COL6A2-208ENST00000485591 STX18Q9P2W9 335 aaKnown RBP17.59■□□□□ 0.41
COL6A2-208ENST00000485591 MAGED1Q9Y5V3 778 aaPredicted RBP17.59■□□□□ 0.41
COL6A2-208ENST00000485591 CDH10Q9Y6N8 788 aa17.59■□□□□ 0.41
COL6A2-208ENST00000485591 PRSS44E7EML9 344 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 G3V2T6 193 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 COX5AP20674 150 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 PRKACGP22612 351 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 GRNP28799 593 aaKnown RBP17.58■□□□□ 0.4
COL6A2-208ENST00000485591 SLC6A6P31641 620 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 RPL27P61353 136 aaKnown RBP17.58■□□□□ 0.4
COL6A2-208ENST00000485591 TOP3AQ13472 1001 aaPredicted RBP17.58■□□□□ 0.4
COL6A2-208ENST00000485591 CAMK2DQ13557 499 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 P2RY6Q15077 328 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 FAM205BPQ63HN1 556 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 FAHD1Q6P587 224 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 DPY19L2P2Q6ZN68 376 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 FAM122BQ7Z309 247 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 KIF18BQ86Y91 864 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 PQLC1Q8N2U9 271 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 DNAJC9Q8WXX5 260 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 SLC25A44Q96H78 314 aaPredicted RBP17.58■□□□□ 0.4
COL6A2-208ENST00000485591 LRR1Q96L50 414 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 PSMG3-AS1Q96PY0 264 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 TSPAN32Q96QS1 320 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 ZNF556Q9HAH1 456 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 NRIP3Q9NQ35 241 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 ASB6Q9NWX5 421 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 IL20Q9NYY1 176 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 UPB1Q9UBR1 384 aa17.58■□□□□ 0.4
COL6A2-208ENST00000485591 A1L4Q6 167 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 CENPBD1B2RD01 187 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 PDLIM1O00151 329 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 UPK3AO75631 287 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 PGA4P0DJD7 388 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 PGA3P0DJD8 388 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ERVK-25P63136 954 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 SORDQ00796 357 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 LGALS3BPQ08380 585 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 FAPQ12884 760 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 CARD17Q5XLA6 110 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 KLHL17Q6TDP4 642 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ZNF771Q7L3S4 317 aaPredicted RBP17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ABHD12BQ7Z5M8 362 aaPredicted RBP17.57■□□□□ 0.4
COL6A2-208ENST00000485591 C20orf196Q8IYI0 205 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ATG16L2Q8NAA4 619 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ZNF519Q8TB69 540 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ZNF566Q969W8 418 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 SAMD8Q96LT4 415 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ALKBH3Q96Q83 286 aaPredicted RBP17.57■□□□□ 0.4
COL6A2-208ENST00000485591 EGLN3Q9H6Z9 239 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 KIF17Q9P2E2 1029 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 IL20RAQ9UHF4 553 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ZNF346Q9UL40 294 aaKnown RBP17.57■□□□□ 0.4
COL6A2-208ENST00000485591 OAZ3Q9UMX2 235 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ADAM18Q9Y3Q7 739 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 LRRK2Q5S007 2527 aa17.57■□□□□ 0.4
COL6A2-208ENST00000485591 ZNF587BE7ETH6 402 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 C19orf84I3L1E1 186 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 KRT33AO76009 404 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 IGHG1P01857 330 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 TP53P04637 393 aaPredicted RBP17.56■□□□□ 0.4
COL6A2-208ENST00000485591 APEHP13798 732 aaKnown RBP17.56■□□□□ 0.4
COL6A2-208ENST00000485591 ACADSP16219 412 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 PSMB1P20618 241 aaKnown RBP17.56■□□□□ 0.4
COL6A2-208ENST00000485591 IGHV1-2P23083 117 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 CCKARP32238 428 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 FAM27E3Q08E93 113 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 ITGADQ13349 1161 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 GPR139Q6DWJ6 353 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 STAC2Q6ZMT1 411 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 CXorf67Q86X51 503 aaPredicted RBP17.56■□□□□ 0.4
COL6A2-208ENST00000485591 GPR137CQ8N3F9 429 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 ICA1LQ8NDH6 482 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 NOXO1Q8NFA2 376 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 OR52L1Q8NGH7 329 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 TMEM54Q969K7 222 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 MRPL13Q9BYD1 178 aaKnown RBP17.56■□□□□ 0.4
COL6A2-208ENST00000485591 GRHPRQ9UBQ7 328 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 REV1Q9UBZ9 1251 aa17.56■□□□□ 0.4
COL6A2-208ENST00000485591 A6NIZ1 184 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 SAC3D1A6NKF1 404 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 RPL36A-HNRNPH2H7BZ11 118 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 ARPC3O15145 178 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 TRMUO75648 421 aaKnown RBP17.55■□□□□ 0.4
COL6A2-208ENST00000485591 SOX14O95416 240 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 PPP1R3DO95685 299 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 IGFBP2P18065 325 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 SDHAP31040 664 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 UGT2B10P36537 528 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 ACVR1BP36896 505 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 PEX19P40855 299 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 CSNK1A1P48729 337 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 RPS6KA3P51812 740 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 RAP1BP61224 184 aa17.55■□□□□ 0.4
COL6A2-208ENST00000485591 RAP1AP62834 184 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms