RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ZNF519Q8TB69 540 aa15.6■□□□□ 0.09
CHMP3-207ENST00000485465 ADAD1Q96M93 576 aaKnown RBP15.6■□□□□ 0.09
CHMP3-207ENST00000485465 EMC6Q9BV81 110 aa15.6■□□□□ 0.09
CHMP3-207ENST00000485465 FAM118AQ9NWS6 357 aa15.6■□□□□ 0.09
CHMP3-207ENST00000485465 EMC9Q9Y3B6 208 aa15.6■□□□□ 0.09
CHMP3-207ENST00000485465 CFAP46Q8IYW2 2715 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 TEX13CA0A0J9YWL9 993 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 A6NIZ1 184 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 ZNF726A6NNF4 738 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 CCL21O00585 134 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 AKAP8O43823 692 aaKnown RBP15.59■□□□□ 0.09
CHMP3-207ENST00000485465 HMGN1P05114 100 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 NOS3P29474 1203 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 ACVR1BP36896 505 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 KIR2DL2P43627 348 aaPredicted RBP15.59■□□□□ 0.09
CHMP3-207ENST00000485465 RAP1BP61224 184 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 RAP1AP62834 184 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 FOXF2Q12947 444 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 SLC35F1Q5T1Q4 408 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 FAM205BPQ63HN1 556 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 NIPAL3Q6P499 406 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 IZUMO2Q6UXV1 221 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 NCCRP1Q6ZVX7 275 aaPredicted RBP15.59■□□□□ 0.09
CHMP3-207ENST00000485465 NUFIP2Q7Z417 695 aaKnown RBP15.59■□□□□ 0.09
CHMP3-207ENST00000485465 HDDC2Q7Z4H3 204 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 NAXEQ8NCW5 288 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 ZNF555Q8NEP9 628 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 PRR7Q8TB68 274 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 RASD2Q96D21 266 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 OR2M2Q96R28 347 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 TEX12Q9BXU0 123 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 PARPBPQ9NWS1 579 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 RCE1Q9Y256 329 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 ZGRF1Q86YA3 2104 aa15.59■□□□□ 0.09
CHMP3-207ENST00000485465 SMG1Q96Q15 3661 aaKnown RBP15.58■□□□□ 0.08
CHMP3-207ENST00000485465 A0A0G2JNJ9 132 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 A0A1B0GUH1 482 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 LOC100130705A0A1B0GUX0 176 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 HSPB2A8KAH6 182 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 SLC16A6O15403 523 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 MRPL33O75394 65 aaKnown RBP15.58■□□□□ 0.08
CHMP3-207ENST00000485465 TRMUO75648 421 aaKnown RBP15.58■□□□□ 0.08
CHMP3-207ENST00000485465 ZNF432O94892 652 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 ACADSP16219 412 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 HIST1H1CP16403 213 aaKnown RBP15.58■□□□□ 0.08
CHMP3-207ENST00000485465 CTSSP25774 331 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 SELENOPP49908 381 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 SIRPAP78324 504 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 ADARB1P78563 741 aaKnown RBP15.58■□□□□ 0.08
CHMP3-207ENST00000485465 RUNX1T1Q06455 604 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 CAMK2DQ13557 499 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 KRR1Q13601 381 aaKnown RBP15.58■□□□□ 0.08
CHMP3-207ENST00000485465 HSPB2Q16082 182 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 MESTQ5EB52 335 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 C12orf73Q69YU5 71 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 CASP12Q6UXS9 341 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 TMEM123Q8N131 208 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 DHRSXQ8N5I4 330 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 CNEP1R1Q8N9A8 125 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 CYGBQ8WWM9 190 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 SLC25A44Q96H78 314 aaPredicted RBP15.58■□□□□ 0.08
CHMP3-207ENST00000485465 HRASLS5Q96KN8 279 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 Q9UFV3 132 aa15.58■□□□□ 0.08
CHMP3-207ENST00000485465 NDRG4Q9ULP0 352 aaKnown RBP15.58■□□□□ 0.08
CHMP3-207ENST00000485465 XKRYO14609 159 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 ARHGEF9O43307 516 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 TNFSF13O75888 250 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 GGT2P36268 569 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 ZNF362Q5T0B9 420 aaPredicted RBP15.57■□□□□ 0.08
CHMP3-207ENST00000485465 TTC23Q5W5X9 447 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 CARD17Q5XLA6 110 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 FJX1Q86VR8 437 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 OR52E2Q8NGJ4 325 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 OR6K3Q8NGY3 331 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 OR4K13Q8NH42 304 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 RND1Q92730 232 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 HDAC2Q92769 488 aaKnown RBP15.57■□□□□ 0.08
CHMP3-207ENST00000485465 ZNF566Q969W8 418 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 SLC38A2Q96QD8 506 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 PITX2Q99697 317 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 ADI1Q9BV57 179 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 SFXN3Q9BWM7 321 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 MRPL13Q9BYD1 178 aaKnown RBP15.57■□□□□ 0.08
CHMP3-207ENST00000485465 C12orf49Q9H741 205 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 CMC2Q9NRP2 79 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 TVP23BQ9NYZ1 205 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 KLHL21Q9UJP4 597 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 GMPPBQ9Y5P6 360 aa15.57■□□□□ 0.08
CHMP3-207ENST00000485465 CENPBD1B2RD01 187 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 H0YAE9 185 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 SURF4O15260 269 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 LRRTM2O43300 516 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 SLC43A1O75387 559 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 SLC2A10O95528 541 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 IFNGP01579 166 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 IGHG1P01857 330 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 PGA4P0DJD7 388 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 PGA3P0DJD8 388 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 CAPGP40121 348 aa15.56■□□□□ 0.08
CHMP3-207ENST00000485465 CDKN2AP42771 156 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms