RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 CDKN1AP38936 164 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 IER3P46695 156 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 CYB561P49447 251 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 TNFSF10P50591 281 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 MLF1P58340 268 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 ERVK-8P63133 956 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 RPL38P63173 70 aaKnown RBP4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 ARG2P78540 354 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 VEZF1Q14119 521 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 FHL5Q5TD97 284 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 IL23RQ5VWK5 629 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 OR4N5Q8IXE1 308 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 C1orf87Q8N0U7 546 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 RBMXL3Q8N7X1 1067 aaKnown RBP4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 FNDC5Q8NAU1 212 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 AGR3Q8TD06 166 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 DYDC1Q8WWB3 177 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 SSMEM1Q8WWF3 244 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 LINC00476Q8WZB0 136 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 RND1Q92730 232 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 PROX1Q92786 737 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 COQ8BQ96D53 544 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 C3orf30Q96M34 536 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 ASCL2Q99929 193 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 UTP23Q9BRU9 249 aaKnown RBP4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 TPPP3Q9BW30 176 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 EBPLQ9BY08 206 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 POLDIP3Q9BY77 421 aaKnown RBP4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 OR8D2Q9GZM6 311 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 ZNF71Q9NQZ8 489 aaPredicted RBP4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 TMEM45AQ9NWC5 275 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 NPAP1Q9NZP6 1156 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 PTGFRNQ9P2B2 879 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 PRODH2Q9UF12 536 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 ATP6V1HQ9UI12 483 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 ZNF639Q9UID6 485 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 ZNF223Q9UK11 482 aaPredicted RBP4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 ADAM21Q9UKJ8 722 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 PAM16Q9Y3D7 125 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 POLR3HQ9Y535 204 aaPredicted RBP4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 U3KQV3 271 aa4.97□□□□□ -1.61
NHLRC3-205ENST00000485407 EML6Q6ZMW3 1958 aa4.96□□□□□ -1.61
NHLRC3-205ENST00000485407 TRBV11-1A0A0K0K1C0 115 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ATP6AP2A0A1C7CYW4 349 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 WASHC1A8K0Z3 465 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 GABRR3A8MPY1 467 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 A8MUA0 341 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 K7EM74 188 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 SDHDO14521 159 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ZNF195O14628 629 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 SCAMP2O15127 329 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ACOX3O15254 700 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 PRKRAO75569 313 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ATP6AP2O75787 350 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 SORBS2O94875 1100 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 WDPCPO95876 746 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 RNF224P0DH78 156 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 SMIM18P0DKX4 95 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 NAGAP17050 411 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 NT5EP21589 574 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 NTSP30990 170 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 HPCAL1P37235 193 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 FEN1P39748 380 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 CDX1P47902 265 aaPredicted RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 TRPC1P48995 793 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 MRPL19P49406 292 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 HLCSP50747 726 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 CNN1P51911 297 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 CLDN8P56748 225 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ID2Q02363 134 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 RIPK1Q13546 671 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ZNF169Q14929 603 aaPredicted RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 LSM12Q3MHD2 195 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 PIGGQ5H8A4 983 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 CPTPQ5TA50 214 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 OPN5Q6U736 354 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 BTNL8Q6UX41 500 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 MEX3DQ86XN8 651 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 RIMKLAQ8IXN7 391 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 TMEM156Q8N614 296 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ZNF615Q8N8J6 731 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 TMEM178AQ8NBL3 297 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 OR8J2Q8NGG1 315 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 SLC22A8Q8TCC7 542 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 SMPDL3BQ92485 455 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 UCN3Q969E3 161 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 EXOSC8Q96B26 276 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 PPWD1Q96BP3 646 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 TESCQ96BS2 214 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 PPCDCQ96CD2 204 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ZBED6CLQ96FA7 236 aaPredicted RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 THOC1Q96FV9 657 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 AMDHD1Q96NU7 426 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 SECISBP2Q96T21 854 aaKnown RBP4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 PRRG4Q9BZD6 226 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 SLA2Q9H6Q3 261 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 GIN1Q9NXP7 522 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 TAS2R9Q9NYW1 312 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 MAT2BQ9NZL9 334 aa4.96□□□□□ -1.62
NHLRC3-205ENST00000485407 ERVK-19Q9WJR5 959 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms