RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PLXDC2Q6UX71 529 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 DPY19L2P2Q6ZN68 376 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 TUBA1AQ71U36 451 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 MEPCEQ7L2J0 689 aaKnown RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 SLC46A3Q7Z3Q1 461 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ATG4DQ86TL0 474 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ADCK1Q86TW2 530 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 MARCH3Q86UD3 253 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 CD163Q86VB7 1156 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 CPOQ8IVL8 374 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 SLC15A4Q8N697 577 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 TMEM251Q8N6I4 163 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 NANOGP1Q8N7R0 232 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ZFP62Q8NB50 900 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 FAM98AQ8NCA5 519 aaKnown RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 OR5M9Q8NGP3 310 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 LGALS12Q96DT0 336 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ZHX1-C8orf76Q96EF9 292 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ERMAPQ96PL5 475 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 TNFRSF13CQ96RJ3 184 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 SLC6A15Q9H2J7 730 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 GALNT9Q9HCQ5 603 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 NANSQ9NR45 359 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 PLEKHB1Q9UF11 243 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 SLC6A5Q9Y345 797 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ARHGAP21Q5T5U3 1957 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 NPIPA2E9PIF3 369 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 NPIPA3F8WFD2 350 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 KLRC4-KLRK1H3BQV0 150 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 M0R082 166 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 TP53I11O14683 189 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 IDH3BO43837 385 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 FADS1O60427 444 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 PPP1R3DO95685 299 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 P04436 131 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 SCG5P05408 212 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 TSPAN19P0C672 248 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 ABOP16442 354 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 MSX1P28360 303 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 TACR3P29371 465 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 UGT2B10P36537 528 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 LIPAP38571 399 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 CA7P43166 264 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 CAPZA2P47755 286 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 SLC16A1P53985 500 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 WNT4P56705 351 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 LSM3P62310 102 aaKnown RBP6.23□□□□□ -1.41
BRCA1-216ENST00000484087 PPIAP62937 165 aaKnown RBP6.23□□□□□ -1.41
BRCA1-216ENST00000484087 ACTC1P68032 377 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 ACTA1P68133 377 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 RELBQ01201 579 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 FOXO1Q12778 655 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 POU4F2Q12837 409 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 MLLT11Q13015 90 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-216ENST00000484087 TSTQ16762 297 aaKnown RBP6.23□□□□□ -1.41
BRCA1-216ENST00000484087 KLHL12Q53G59 568 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 SLC35F1Q5T1Q4 408 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 LCN1P1Q5VSP4 162 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 PLBD1Q6P4A8 553 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 OPN5Q6U736 354 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 APOOLQ6UXV4 268 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 TMPRSS11AQ6ZMR5 421 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 GDPGP1Q6ZNW5 385 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 SLC16A12Q6ZSM3 486 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 USP43Q70EL4 1123 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 GRINAQ7Z429 371 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 BCDIN3DQ7Z5W3 292 aaKnown RBP6.23□□□□□ -1.41
BRCA1-216ENST00000484087 KLHL36Q8N4N3 616 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 UFD1Q92890 307 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 ARSGQ96EG1 525 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 MRPL48Q96GC5 212 aaKnown RBP6.23□□□□□ -1.41
BRCA1-216ENST00000484087 ADAM19Q9H013 955 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 MCCC2Q9HCC0 563 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 SH2D2AQ9NP31 389 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 ISYNA1Q9NPH2 558 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 HINT3Q9NQE9 182 aaKnown RBP6.23□□□□□ -1.41
BRCA1-216ENST00000484087 INPP5EQ9NRR6 644 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 SACM1LQ9NTJ5 587 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 TAS2R10Q9NYW0 307 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 KLRF1Q9NZS2 232 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 SPRR3Q9UBC9 169 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 SEC14L4Q9UDX3 406 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF229Q9UJW7 825 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 UNC79Q9P2D8 2635 aa6.23□□□□□ -1.41
BRCA1-216ENST00000484087 TRAV36DV7A0A075B6V5 113 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 LOC100506127A0A0U1RQW1 187 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 BLOC1S5-TXNDC5H3BN57 136 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 C19orf84I3L1E1 186 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 ARPC3O15145 178 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 OIP5O43482 229 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 OR2T1O43869 369 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 GMFGO60234 142 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 CLPXO76031 633 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 GLSO94925 669 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-216ENST00000484087 OR6A2O95222 327 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 SLC2A10O95528 541 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 MT-ATP6P00846 226 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 GADD45AP24522 165 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 GTF2E2P29084 291 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms