RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ZNF300Q96RE9 604 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 SORT1Q99523 831 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 KCTD14Q9BQ13 255 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 ARMC7Q9H6L4 198 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 MOB1AQ9H8S9 216 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 RETNQ9HD89 108 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 B3GNT2Q9NY97 397 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 EMC3Q9P0I2 261 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 SLC2A6Q9UGQ3 507 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 LGALS13Q9UHV8 139 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 MRM2Q9UI43 246 aaKnown RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 FADS3Q9Y5Q0 445 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 URGCP-MRPS24S4R325 110 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 V9GYY9 64 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 ADCY9O60503 1353 aa3.65□□□□□ -1.82
PTCD3-214ENST00000483925 A0A087WW49 117 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 A0A0A6YYH2 397 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 LOC100131303A0A0U1RQF7 123 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 A0A1B0GTH9 108 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 TSPAN11A1L157 253 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 TMEM213A2RRL7 107 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 FAM231BA6NCW3 169 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 A6NJ64 397 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 SMIM1B2RUZ4 78 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 E9PLD3 99 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 LOC110117498-PIK3R3F6TDL0 507 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ZNF749O43361 778 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 EMC8O43402 210 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 BUB3O43684 328 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 CLDN11O75508 207 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 PLEKHA8P1O95397 391 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 CLIC3O95833 236 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 LALBAP00709 142 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 IGHV2-5P01817 119 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 HOXD4P09016 255 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 PSMC3P17980 439 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 SPRP35270 261 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 DNASE1L1P49184 302 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ARHGDIBP52566 201 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 CLDN6P56747 220 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 OR2B6P58173 313 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 UBE2G2P60604 165 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 CHRNB3Q05901 458 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 SERTAD2Q14140 314 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 TRMT5Q32P41 509 aaKnown RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 CNPY1Q3B7I2 92 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 SLC35E4Q6ICL7 350 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ADNP2Q6IQ32 1131 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 MBOAT1Q6ZNC8 495 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 CARM1Q86X55 608 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ZNF547Q8IVP9 402 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 SPAG16Q8N0X2 631 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 PDIK1LQ8N165 341 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 RNF10Q8N5U6 811 aaKnown RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 PRSS33Q8NF86 280 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 NOXO1Q8NFA2 376 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 OR6K2Q8NGY2 324 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 OR2G2Q8NGZ5 317 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 OR2T6Q8NHC8 308 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ITFG1Q8TB96 612 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 CRYGNQ8WXF5 182 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ANKRD7Q92527 254 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 NABP1Q96AH0 204 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 MS4A4EQ96PG1 132 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ZNF251Q9BRH9 671 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 C7orf50Q9BRJ6 194 aaKnown RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 DDX31Q9H8H2 851 aaKnown RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 ZNF71Q9NQZ8 489 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 NECAP2Q9NVZ3 263 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 MCUBQ9NWR8 336 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 TMEM181Q9P2C4 612 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 DCDC2Q9UHG0 476 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 RCL1Q9Y2P8 373 aaKnown RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 L3MBTL1Q9Y468 752 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 CPQQ9Y646 472 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 AUP1Q9Y679 476 aa3.65□□□□□ -1.83
PTCD3-214ENST00000483925 USP42Q9H9J4 1324 aaKnown RBP3.65□□□□□ -1.83
PTCD3-214ENST00000483925 IGHV3OR16-12A0A075B7B8 117 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 IGHV3-38A0A0C4DH36 116 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 A0A1B0GWB2 263 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 USP27XA6NNY8 438 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 LYRM9A8MSI8 78 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 PRSS44E7EML9 344 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 F8VP50 259 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 F8VZ95 297 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 DCTN6O00399 190 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 MRPS12O15235 138 aaKnown RBP3.64□□□□□ -1.83
PTCD3-214ENST00000483925 LDOC1O95751 146 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-214ENST00000483925 LSM8O95777 96 aaKnown RBP3.64□□□□□ -1.83
PTCD3-214ENST00000483925 IGHV3-9P01782 118 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 HBE1P02100 147 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 SERPINA5P05154 406 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 RHOCP08134 193 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 T-ENOLP0DO92 83 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 HTR1FP30939 366 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 NBL1P41271 181 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 CDKN2AP42771 156 aaKnown RBP3.64□□□□□ -1.83
PTCD3-214ENST00000483925 GPM6AP51674 278 aa3.64□□□□□ -1.83
PTCD3-214ENST00000483925 RIDAP52758 137 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms