RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 XRCC3O43542 346 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 OR2C1O95371 312 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 TBX6O95947 436 aaPredicted RBP7.17□□□□□ -1.26
COL4A5-205ENST00000483338 PDYNP01213 254 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 IFNW1P05000 195 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 DGKGP49619 791 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 CDK5Q00535 292 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 RASGEF1BQ0VAM2 473 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 CBFBQ13951 182 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 HMGN3Q15651 99 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 DUSP5Q16690 384 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 RNF151Q2KHN1 245 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 FRRS1Q6ZNA5 592 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 IQCHQ86VS3 1027 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF280BQ86YH2 543 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 FRMD1Q8N878 549 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 STEAP2Q8NFT2 490 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 SEMA6DQ8NFY4 1073 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 SLC25A43Q8WUT9 341 aaPredicted RBP7.17□□□□□ -1.26
COL4A5-205ENST00000483338 IGSF21Q96ID5 467 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 SEC22AQ96IW7 307 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 ATG5Q9H1Y0 275 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 GPR173Q9NS66 373 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 DDIT4Q9NX09 232 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 FBXW11Q9UKB1 542 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 COLEC10Q9Y6Z7 277 aa7.17□□□□□ -1.26
COL4A5-205ENST00000483338 WDR90Q96KV7 1748 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CLDN5O00501 218 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 GGCTO75223 188 aaKnown RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CTSHP09668 335 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 EPHA1P21709 976 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 NSG1P42857 185 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ID4P47928 161 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 P2RX1P51575 399 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 PTTG1IPP53801 180 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 IL2P60568 153 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ERVFC1-1P60608 527 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ACVR1Q04771 509 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SCARB2Q14108 478 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF235Q14590 738 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SIRPB2Q5JXA9 342 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 UBE2NLQ5JXB2 153 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 KHDRBS2Q5VWX1 349 aaKnown RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR2T2Q6IF00 324 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ARL9Q6T311 187 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 KIRREL2Q6UWL6 708 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SMIM15Q7Z3B0 74 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SCN4BQ8IWT1 228 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR1J1Q8NGS3 322 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR4L1Q8NH43 312 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 APIPQ96GX9 242 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF426Q9BUY5 554 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 EBPLQ9BY08 206 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 POTEKPQ9BYX7 375 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 PLA2G12AQ9BZM1 189 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CDT1Q9H211 546 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 GOLGA2P5Q9HBQ8 144 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CYTL1Q9NRR1 136 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 RNF186Q9NXI6 227 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 GNG8Q9UK08 70 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ATG4BQ9Y4P1 393 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 MTCH2Q9Y6C9 303 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 A0A0B4J2A0 478 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 A0A1B0GTI1 187 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ANTXRLA6NF34 631 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 TGFB1P01137 390 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 IGHA1P01876 353 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CXCL1P09341 107 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR5I1Q13606 314 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ENPP2Q13822 863 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 RHEBQ15382 184 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 DCST1Q5T197 706 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 LEMD1Q68G75 181 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 TCTN3Q6NUS6 607 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 FAM199XQ6PEV8 388 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 TEX38Q6PEX7 206 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 LHFPL4Q7Z7J7 247 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR52N4Q8NGI2 321 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR5M8Q8NGP6 311 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR4K15Q8NH41 348 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ABHD4Q8TB40 342 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CD200R1Q8TD46 325 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 THAP3Q8WTV1 239 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF775Q96BV0 537 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 FAM46AQ96IP4 442 aaKnown RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 APOLD1Q96LR9 279 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 TIMP4Q99727 224 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 GPA33Q99795 319 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 NKX3-1Q99801 234 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CACNG4Q9UBN1 327 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SUSD2Q9UGT4 822 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SHPKQ9UHJ6 478 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 HS3ST3B1Q9Y662 390 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 KIAA0100Q14667 2235 aaKnown RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 A0A1W2PPK0 400 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CBY3A6NI87 242 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CCSO14618 274 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms