RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ULBP2Q9BZM5 246 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 MYLK2Q9H1R3 596 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 CBLN4Q9NTU7 201 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 POFUT2Q9Y2G5 429 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 TLN2Q9Y4G6 2542 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 IGHV1-18A0A0C4DH31 117 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 ZNF99A8MXY4 864 aaPredicted RBP12.11□□□□□ -0.47
VARS-225ENST00000482996 ATP6V1G2-DDX39BF2Z307 99 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 CXCR6O00574 342 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 NME4O00746 187 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 IGF2P01344 180 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 CD8AP01732 235 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 CRYAAP02489 173 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 MT-ND1P03886 318 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 IFNGR1P15260 489 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 PRDX6P30041 224 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 CAPZA2P47755 286 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 CSNK1A1P48729 337 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 GSK3BP49841 420 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 BIDP55957 195 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 TUBA1BP68363 451 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 TUBA4AP68366 448 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 ST3GAL3Q11203 375 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 C3orf36Q3SXR2 165 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 NHLRC1Q6VVB1 395 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 B3GLCTQ6Y288 498 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 TUBA1AQ71U36 451 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 SLC35D2Q76EJ3 337 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 NKAIN4Q8IVV8 208 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 MUC15Q8N387 334 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 LRRC17Q8N6Y2 441 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 FAM169BQ8N8A8 192 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 OR6X1Q8NH79 312 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 TMEM239Q8WW34 195 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 SGTBQ96EQ0 304 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 COX4I2Q96KJ9 171 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 KATNB1Q9BVA0 655 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
VARS-225ENST00000482996 MEPEQ9NQ76 525 aaPredicted RBP12.11□□□□□ -0.47
VARS-225ENST00000482996 TAS2R5Q9NYW4 299 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 CRNNQ9UBG3 495 aaPredicted RBP12.11□□□□□ -0.47
VARS-225ENST00000482996 MOKQ9UQ07 419 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 MED31Q9Y3C7 131 aa12.11□□□□□ -0.47
VARS-225ENST00000482996 CSPG4Q6UVK1 2322 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 TRIM64A6NGJ6 449 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 BLOC1S5-TXNDC5H3BN57 136 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 OR7A10O76100 309 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 ZNF682O95780 498 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 IFNW1P05000 195 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 ASAH2BP0C7U1 165 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 BMP4P12644 408 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 CBR1P16152 277 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 FUT1P19526 365 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 APOBEC3AP31941 199 aaPredicted RBP12.1□□□□□ -0.47
VARS-225ENST00000482996 UGT2B15P54855 530 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 PSME3P61289 254 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 CHRNB3Q05901 458 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 PHYHD1Q5SRE7 291 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 C8orf82Q6P1X6 216 aaPredicted RBP12.1□□□□□ -0.47
VARS-225ENST00000482996 ZNF813Q6ZN06 617 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 SLC46A3Q7Z3Q1 461 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 PFN4Q8NHR9 129 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 TMEM255BQ8WV15 326 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 GEMIN6Q8WXD5 167 aaKnown RBP12.1□□□□□ -0.47
VARS-225ENST00000482996 ZNF837Q96EG3 531 aaPredicted RBP12.1□□□□□ -0.47
VARS-225ENST00000482996 PRRC1Q96M27 445 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 LRRC37BQ96QE4 947 aa12.1□□□□□ -0.47
VARS-225ENST00000482996 KCTD14Q9BQ13 255 aaPredicted RBP12.1□□□□□ -0.47
VARS-225ENST00000482996 GSX1Q9H4S2 264 aaPredicted RBP12.1□□□□□ -0.47
VARS-225ENST00000482996 GMPR2Q9P2T1 348 aaKnown RBP12.1□□□□□ -0.47
VARS-225ENST00000482996 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 A0A1W2PRG6 482 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 HTR3EA5X5Y0 456 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 MCIDASD6RGH6 385 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 SMAD7O15105 426 aaKnown RBP12.09□□□□□ -0.47
VARS-225ENST00000482996 ENTPD5O75356 428 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 SEC14L2O76054 403 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 BCL10O95999 233 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 IGLV1-44P01699 117 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 CECR9P0C854 216 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 ARR3P36575 388 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 NAAAQ02083 359 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 CLEC12BQ2HXU8 276 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 IFI44LQ53G44 452 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 CLEC9AQ6UXN8 241 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 FKBP9P1Q75LS8 142 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 HDDC2Q7Z4H3 204 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 VTCN1Q7Z7D3 282 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 OR4F15Q8NGB8 312 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 NANOS1Q8WY41 292 aaKnown RBP12.09□□□□□ -0.47
VARS-225ENST00000482996 ZNF566Q969W8 418 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 FAM162AQ96A26 154 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 SLC25A44Q96H78 314 aaPredicted RBP12.09□□□□□ -0.47
VARS-225ENST00000482996 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 CACNG6Q9BXT2 260 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 GLTPQ9NZD2 209 aa12.09□□□□□ -0.47
VARS-225ENST00000482996 ERICH4A6NGS2 130 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 GMNNO75496 209 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms