RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 APEHP13798 732 aaKnown RBP10.86□□□□□ -0.67
SDC1-206ENST00000482879 CTSSP25774 331 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 EPHA2P29317 976 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 NOS3P29474 1203 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 NTF4P34130 210 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 ACVR1BP36896 505 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 KIR2DL2P43627 348 aaPredicted RBP10.86□□□□□ -0.67
SDC1-206ENST00000482879 SMSP52788 366 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 CDK5Q00535 292 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 MYBPC1Q00872 1141 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 CAMK2DQ13557 499 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 PTGES3Q15185 160 aaKnown RBP10.86□□□□□ -0.67
SDC1-206ENST00000482879 GUSBP1Q15486 140 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 HSPB2Q16082 182 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 PGGHGQ32M88 737 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 SLC35F1Q5T1Q4 408 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 ARMC4Q5T2S8 1044 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 TMEM236Q5W0B7 351 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 GPR139Q6DWJ6 353 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 ACSM5Q6NUN0 579 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 SLC27A4Q6P1M0 643 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 NIPAL3Q6P499 406 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 CASP12Q6UXS9 341 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 FAM214BQ7L5A3 538 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 FAM122BQ7Z309 247 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 LNX2Q8N448 690 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 ARIH2OSQ8N7S6 290 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 NAXEQ8NCW5 288 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 OR6X1Q8NH79 312 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 ASB10Q8WXI3 467 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 TMEM45BQ96B21 275 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 RASD2Q96D21 266 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 ADAD1Q96M93 576 aaKnown RBP10.86□□□□□ -0.67
SDC1-206ENST00000482879 RDH12Q96NR8 316 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 TSPAN32Q96QS1 320 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 MBOAT4Q96T53 435 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 C12orf49Q9H741 205 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 SLC25A19Q9HC21 320 aa10.86□□□□□ -0.67
SDC1-206ENST00000482879 NCOA6Q14686 2063 aaPredicted RBP10.86□□□□□ -0.67
SDC1-206ENST00000482879 SMG1Q96Q15 3661 aaKnown RBP10.86□□□□□ -0.67
SDC1-206ENST00000482879 A0A0G2JNJ9 132 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 TEX13CA0A0J9YWL9 993 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 A6NIZ1 184 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 ZAR1LA6NP61 321 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 XKRYO14609 159 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 IMPA2O14732 288 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 TRMUO75648 421 aaKnown RBP10.85□□□□□ -0.67
SDC1-206ENST00000482879 TXNDC12O95881 172 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 HMGN1P05114 100 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 ACADSP16219 412 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 SDHAP31040 664 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 GRK5P34947 590 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 VHLP40337 213 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 SELENOPP49908 381 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 RAP1BP61224 184 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 RAP1AP62834 184 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 C4orf17Q53FE4 359 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 CARD17Q5XLA6 110 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 FAM205BPQ63HN1 556 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 VWA1Q6PCB0 445 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.85□□□□□ -0.67
SDC1-206ENST00000482879 HDDC2Q7Z4H3 204 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 WDFY1Q8IWB7 410 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 ZNF100Q8IYN0 542 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 ZNF555Q8NEP9 628 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 OR6K3Q8NGY3 331 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 ZNF519Q8TB69 540 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 OR2M2Q96R28 347 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 TEX12Q9BXU0 123 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 GRIP2Q9C0E4 1043 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 FAM118AQ9NWS6 357 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 Q9UFV3 132 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 RCE1Q9Y256 329 aa10.85□□□□□ -0.67
SDC1-206ENST00000482879 SPTBN1Q01082 2364 aaKnown RBP10.84□□□□□ -0.67
SDC1-206ENST00000482879 H0YJX3 145 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 ARHGEF9O43307 516 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 SLC43A1O75387 559 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 TNFSF13O75888 250 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 ZNF432O94892 652 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 IL18BPO95998 194 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 IGHG1P01857 330 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 HIST1H1CP16403 213 aaKnown RBP10.84□□□□□ -0.67
SDC1-206ENST00000482879 OPRM1P35372 400 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 AQP4P55087 323 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 CLRN1P58418 232 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 RUNX1T1Q06455 604 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 KRR1Q13601 381 aaKnown RBP10.84□□□□□ -0.67
SDC1-206ENST00000482879 MESTQ5EB52 335 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 SLX4IPQ5VYV7 408 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 BTLAQ7Z6A9 289 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 JAZF1Q86VZ6 243 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 CCDC71Q8IV32 467 aaPredicted RBP10.84□□□□□ -0.67
SDC1-206ENST00000482879 DHRSXQ8N5I4 330 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 SYT14Q8NB59 555 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 OR52E2Q8NGJ4 325 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 OR4K13Q8NH42 304 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 CYGBQ8WWM9 190 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 HDAC2Q92769 488 aaKnown RBP10.84□□□□□ -0.67
SDC1-206ENST00000482879 ZNF566Q969W8 418 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms