RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 TSACCQ96A04 125 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 BPIFA2Q96DR5 249 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 NUS1Q96E22 293 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 CENPNQ96H22 339 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 TMEM19Q96HH6 336 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ZNF385AQ96PM9 386 aaKnown RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 MCCC1Q96RQ3 725 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 ATP5SQ99766 215 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 SLC6A7Q99884 636 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ULBP1Q9BZM6 244 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ACTR3CQ9C0K3 210 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 HOXD1Q9GZZ0 328 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 RAB6CQ9H0N0 254 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 RBM38Q9H0Z9 239 aaKnown RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 SLC25A51Q9H1U9 297 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PPA2Q9H2U2 334 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GAREM1Q9H706 876 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ACKR4Q9NPB9 350 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ACP6Q9NPH0 428 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GKN1Q9NS71 199 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ZNF446Q9NWS9 450 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 FLRT3Q9NZU0 649 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 RNF7Q9UBF6 113 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GAGE2DQ9UEU5 116 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PSG11Q9UQ72 335 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 SLC17A4Q9Y2C5 497 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ACOT9Q9Y305 439 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PAM16Q9Y3D7 125 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 STYXL1Q9Y6J8 313 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 COLEC10Q9Y6Z7 277 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ABCB11O95342 1321 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PCDH11XQ9BZA7 1347 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 EIF3AQ14152 1382 aaKnown RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 TNRQ92752 1358 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 IGHV4-28A0A0C4DH34 117 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 KIR2DL5BA0A0G2JN68 375 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 KIR2DL5BA0A0G2JPC4 375 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 PSMB11A5LHX3 300 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ZNF233A6NK53 670 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 MIF4GDA9UHW6 222 aaKnown RBP3.57□□□□□ -1.84
VPS41-212ENST00000482217 E9PAM4 449 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 F5H768 121 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 SIRPB1O00241 398 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ACOT8O14734 319 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 TNFRSF13BO14836 293 aaPredicted RBP3.57□□□□□ -1.84
VPS41-212ENST00000482217 AZIN1O14977 448 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ACOX3O15254 700 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 BIRC5O15392 142 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 SLC31A2O15432 143 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 FGF16O43320 207 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 KIAA0513O60268 411 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 SUPT3HO75486 399 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ATP5LO75964 103 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 PCF11O94913 1555 aaKnown RBP3.57□□□□□ -1.84
VPS41-212ENST00000482217 LRATO95237 230 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 CTDNEP1O95476 244 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 TDP2O95551 362 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 C1orf105O95561 183 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 SERPINA5P05154 406 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 NBEAP1P0C6P0 100 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 CCDC166P0CW27 439 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 NQO1P15559 274 aaKnown RBP3.57□□□□□ -1.84
VPS41-212ENST00000482217 DPEP1P16444 411 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 AOC1P19801 751 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 AADACP22760 399 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 CEACAM6P40199 344 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 CYB561P49447 251 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 FUT6P51993 359 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 MSH6P52701 1360 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 CRYBA4P53673 196 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 FAM3AP98173 230 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 SKP2Q13309 424 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 DYNC1I2Q13409 638 aaKnown RBP3.57□□□□□ -1.84
VPS41-212ENST00000482217 IL18R1Q13478 541 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 KLF5Q13887 457 aaPredicted RBP3.57□□□□□ -1.84
VPS41-212ENST00000482217 CEACAM7Q14002 265 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 FLOT2Q14254 428 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 RFX4Q33E94 735 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 RFTN2Q52LD8 501 aaPredicted RBP3.57□□□□□ -1.84
VPS41-212ENST00000482217 FRMPD3Q5JV73 1810 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 FNBP1LQ5T0N5 605 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 OR2G6Q5TZ20 316 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ARID2Q68CP9 1835 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 FRMPD2BQ6IN97 320 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 PRR5LQ6MZQ0 368 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ZNF790Q6PG37 636 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 DNM1P34Q6PK57 102 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 DRAM2Q6UX65 266 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 CERS6Q6ZMG9 384 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 SH2D5Q6ZV89 423 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ASB18Q6ZVZ8 466 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 COX15Q7KZN9 410 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 TIPARPQ7Z3E1 657 aaKnown RBP3.57□□□□□ -1.84
VPS41-212ENST00000482217 COX8CQ7Z4L0 72 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ANKRD37Q7Z713 158 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 ITIH5Q86UX2 942 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 PRAG1Q86YV5 1406 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 TRAPPC5Q8IUR0 188 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 CMTM1Q8IZ96 169 aa3.57□□□□□ -1.84
VPS41-212ENST00000482217 KIR2DL5AQ8N109 375 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms