RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 DUSP21Q9H596 190 aa11.15□□□□□ -0.62
IFT88-206ENST00000482172 RNF122Q9H9V4 155 aa11.15□□□□□ -0.62
IFT88-206ENST00000482172 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
IFT88-206ENST00000482172 CNOT2Q9NZN8 540 aaKnown RBP11.15□□□□□ -0.62
IFT88-206ENST00000482172 VSX1Q9NZR4 365 aaPredicted RBP11.15□□□□□ -0.62
IFT88-206ENST00000482172 CAMK2AQ9UQM7 478 aa11.15□□□□□ -0.62
IFT88-206ENST00000482172 IGHV3-15A0A0B4J1V0 119 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 A0A1B0GTH9 108 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 IRGMA1A4Y4 181 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 PRSS37A4D1T9 235 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 SLC22A31A6NKX4 558 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 CLCA1A8K7I4 914 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 AHRRA9YTQ3 701 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 GPR171O14626 319 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 AKAP8O43823 692 aaKnown RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 FAM20BO75063 409 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 SERPINI2O75830 405 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 RPSAP08865 295 aaKnown RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 PIPP12273 146 aaPredicted RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 FCGR2AP12318 317 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 KLK2P20151 261 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 SLC2A5P22732 501 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 HTR1FP30939 366 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 SLC15A1P46059 708 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 LGALS3BPQ08380 585 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 RNPS1Q15287 305 aaKnown RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 SMN1Q16637 294 aaKnown RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 SLC35D3Q5M8T2 416 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 GTF2IRD2BQ6EKJ0 949 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 NIPAL3Q6P499 406 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 LEG1Q6P5S2 330 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 MEPCEQ7L2J0 689 aaKnown RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 GTF2IRD2Q86UP8 949 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 FNDC8Q8TC99 324 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 ROBO4Q8WZ75 1007 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 SLC25A44Q96H78 314 aaPredicted RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 TXNDC15Q96J42 360 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 KCNK17Q96T54 332 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 TUBA1CQ9BQE3 449 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 MRPL13Q9BYD1 178 aaKnown RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 CCNB1IP1Q9NPC3 277 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 FKBP14Q9NWM8 211 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 HAO2Q9NYQ3 351 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 DNAJC27Q9NZQ0 273 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 KLHL9Q9P2J3 617 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 KLHL13Q9P2N7 655 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 WARS2Q9UGM6 360 aaKnown RBP11.14□□□□□ -0.63
IFT88-206ENST00000482172 PSORS1C1Q9UIG5 152 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 MOKQ9UQ07 419 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 RCE1Q9Y256 329 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 KIAA1549Q9HCM3 1950 aa11.14□□□□□ -0.63
IFT88-206ENST00000482172 IGF2RP11717 2491 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 ASPMQ8IZT6 3477 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 EFCAB10A6NFE3 127 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 FAM183AA6NL82 134 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 ZNF726A6NNF4 738 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 ZNF724A8MTY0 619 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 ARHGEF9O43307 516 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 XPNPEP2O43895 674 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 TRMUO75648 421 aaKnown RBP11.13□□□□□ -0.63
IFT88-206ENST00000482172 WISP2O76076 250 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 IGHG1P01857 330 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 DBTP11182 482 aaKnown RBP11.13□□□□□ -0.63
IFT88-206ENST00000482172 NR2C1P13056 603 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 CRABP1P29762 137 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 PTGER4P35408 488 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 CENPAP49450 140 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 TDGF1P3P51864 188 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 CDH11P55287 796 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 BIDP55957 195 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 SLC35A2P78381 396 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 RASGEF1BQ0VAM2 473 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 MELKQ14680 651 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 PON3Q15166 354 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 KLHL22Q53GT1 634 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 BCDIN3DQ7Z5W3 292 aaKnown RBP11.13□□□□□ -0.63
IFT88-206ENST00000482172 CISD2Q8N5K1 135 aaKnown RBP11.13□□□□□ -0.63
IFT88-206ENST00000482172 ZIC4Q8N9L1 334 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 CYB561A3Q8NBI2 242 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 ZNF540Q8NDQ6 660 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 OR2T4Q8NH00 348 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 GGHQ92820 318 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 TMEM45BQ96B21 275 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 INTS12Q96CB8 462 aaKnown RBP11.13□□□□□ -0.63
IFT88-206ENST00000482172 SLX1AQ9BQ83 275 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 PRRG4Q9BZD6 226 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 BCO1Q9HAY6 547 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 MED29Q9NX70 200 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 LUZP4Q9P127 313 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 FLVCR1Q9Y5Y0 555 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 FKBP7Q9Y680 259 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 MED12Q93074 2177 aa11.13□□□□□ -0.63
IFT88-206ENST00000482172 CELSR3Q9NYQ7 3312 aa11.12□□□□□ -0.63
IFT88-206ENST00000482172 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
IFT88-206ENST00000482172 SLC35F4A4IF30 521 aa11.12□□□□□ -0.63
IFT88-206ENST00000482172 SLC22A20A6NK97 555 aa11.12□□□□□ -0.63
IFT88-206ENST00000482172 SMNDC1O75940 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
IFT88-206ENST00000482172 ZNF432O94892 652 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms