RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, human

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCB-206	ENST00000482000	SS18L1	O75177	396 aa	Predicted RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	CRCP	O75575	148 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	FGF4	P08620	206 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	LINGO3	P0C6S8	592 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	LINC00032	P0C843	101 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	PRPS2	P11908	318 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	NEFH	P12036	1026 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	BCKDHA	P12694	445 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	POU2F1	P14859	743 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	ZNF17	P17021	662 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	IL11	P20809	199 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	EFNA1	P20827	205 aa	Predicted RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	TBXA2R	P21731	343 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	MYF6	P23409	242 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	POU1F1	P28069	291 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	SHC1	P29353	583 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	PSMD4	P55036	377 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	RPL38	P63173	70 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	ROR2	Q01974	943 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	LTB	Q06643	244 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	FGFBP1	Q14512	234 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	RNPS1	Q15287	305 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	CD226	Q15762	336 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	TST	Q16762	297 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	XKR7	Q5GH72	579 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	CCNJ	Q5T5M9	372 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	SHE	Q5VZ18	495 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	STAC2	Q6ZMT1	411 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000		Q71RC1	249 aa	Predicted RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	CHMP1B	Q7LBR1	199 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	BIVM	Q86UB2	503 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	C4orf33	Q8N1A6	199 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	LRRC75A-AS1	Q8N1F1	130 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	BANP	Q8N9N5	519 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000		Q8N9P0	234 aa	Predicted RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	CDRT4	Q8N9R6	151 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	GATS	Q8NAP1	163 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	OR10D3	Q8NH80	312 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	PSMA8	Q8TAA3	256 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	GPR151	Q8TDV0	419 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	TWIST2	Q8WVJ9	160 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	ZNF524	Q96C55	264 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	PPCDC	Q96CD2	204 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	FAM120B	Q96EK7	910 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	PIK3IP1	Q96FE7	263 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	C16orf58	Q96GQ5	468 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	C3orf30	Q96M34	536 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	RNF145	Q96MT1	663 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	C7orf26	Q96N11	449 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	PIP5K1A	Q99755	562 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	MED18	Q9BUE0	208 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	PCDHB16	Q9NRJ7	776 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	PLSCR4	Q9NRQ2	329 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	MED17	Q9NVC6	651 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	ZNF226	Q9NYT6	803 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	SLC17A7	Q9P2U7	560 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	IL36RN	Q9UBH0	155 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	GIMAP2	Q9UG22	337 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	MRTO4	Q9UKD2	239 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	CLEC4A	Q9UMR7	237 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	A4GNT	Q9UNA3	340 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	EIF3L	Q9Y262	564 aa	Known RBP	4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	CARD8	Q9Y2G2	431 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	FIS1	Q9Y3D6	152 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000	HIVEP2	P31629	2446 aa		4.36	□□□□□ -1.71
PRKCB-206	ENST00000482000		A0A087WZY1	265 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000		A0A0J9YW62	118 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000		A0A1W2PQD3	144 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	FAM90A10P	A6NDY2	464 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	INAFM1	C9JVW0	142 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	NPIPB9	F8W1W9	429 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	IFNL4	K9M1U5	179 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	TNFSF11	O14788	317 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	SCAMP2	O15127	329 aa	Known RBP	4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	EFNA2	O43921	213 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	CXCL13	O43927	109 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	NTN1	O95631	604 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	LY6G6D	O95868	133 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	OPN1LW	P04000	364 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	HMGN2	P05204	90 aa	Known RBP	4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	LAMP1	P11279	417 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	PSMB1	P20618	241 aa	Known RBP	4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	AGTR1	P30556	359 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	ALDH3A1	P30838	453 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	LCN1	P31025	176 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	ENTPD1	P49961	510 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	CCR9	P51686	369 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	ZNF41	P51814	821 aa	Predicted RBP	4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	LINC00205	P59089	165 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	RPS3A	P61247	264 aa	Known RBP	4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	ZNF117	Q03924	483 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	FOXF1	Q12946	379 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	HNF4G	Q14541	408 aa		4.35	□□□□□ -1.71
PRKCB-206	ENST00000482000	LASP1	Q14847	261 aa	Known RBP	4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms