RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FRMD6-AS1P0C7T7 363 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 FAM157CP0CG43 387 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 HLA-GP17693 338 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 PMCHP20382 165 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 NSG1P42857 185 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 YWHAGP61981 247 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMC6-208ENST00000481708 STK38Q15208 465 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 INPP5JQ15735 1006 aaPredicted RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 HLA-BQ31612 363 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 LSM12Q3MHD2 195 aaKnown RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 KLHL22Q53GT1 634 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 LY6G5CQ5SRR4 150 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 SEL1L2Q5TEA6 688 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 MOB3BQ86TA1 216 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 MCOLN2Q8IZK6 566 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 CLDN19Q8N6F1 224 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 SETD7Q8WTS6 366 aaKnown RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 CA5BP1Q8WTZ4 195 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 DNAJB3Q8WWF6 145 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 RPEQ96AT9 228 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 PLEKHA8Q96JA3 519 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ZNF75AQ96N20 296 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 GFM1Q96RP9 751 aaKnown RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 CNN2Q99439 309 aaKnown RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 TIPINQ9BVW5 301 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 CYTH4Q9UIA0 394 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 FKBP7Q9Y680 259 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 URGCP-MRPS24S4R325 110 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 A0A087WZ39 114 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 A0A0A6YYD4 124 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 IGHV4-28A0A0C4DH34 117 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 C1orf232A0A0U1RR37 186 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 TOR1AO14656 332 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 HSD17B6O14756 317 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 TM9SF1O15321 606 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 NARSO43776 548 aaKnown RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 CNOT3O75175 753 aaKnown RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 DDOSTP39656 456 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 XCR1P46094 333 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 STX17P56962 302 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 POLR2GP62487 172 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMC6-208ENST00000481708 OGDHQ02218 1023 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ST3GAL3Q11203 375 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 RIGQ13278 110 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 UBE2V2Q15819 145 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 EOGTQ5NDL2 527 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 BEND6Q5SZJ8 279 aaPredicted RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 TWF2Q6IBS0 349 aaKnown RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 REEP3Q6NUK4 255 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 GPRIN3Q6ZVF9 776 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ZNF546Q86UE3 836 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 TGIF2LXQ8IUE1 241 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ZNRF1Q8ND25 227 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 C8orf46Q8TAG6 207 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 CDKL2Q92772 493 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 DLX4Q92988 240 aaPredicted RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 CTRCQ99895 268 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 GOLGA2P5Q9HBQ8 144 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 CYB5R1Q9UHQ9 305 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ZDHHC2Q9UIJ5 367 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 H3BNX3 289 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 K7EQS6 105 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ITM2AO43736 263 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 JTBO76095 146 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ESRRBO95718 433 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 SLC35E2BP0CK96 405 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 PSKH1P11801 424 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 RPL3P39023 403 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 HCAR3P49019 387 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 KRTAP10-2P60368 255 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ADARB1P78563 741 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 RAD51Q06609 339 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 LGSNQ5TDP6 509 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 H3F3CQ6NXT2 135 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 DOK6Q6PKX4 331 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 SYS1Q8N2H4 156 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 MARVELD2Q8N4S9 558 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 TMEM156Q8N614 296 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 TTLQ8NG68 377 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 OR2L2Q8NH16 312 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 SMAP2Q8WU79 429 aaPredicted RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 APOBEC4Q8WW27 367 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 CAPSLQ8WWF8 208 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ART4Q93070 314 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 CMTM5Q96DZ9 223 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 FEM1AQ9BSK4 669 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 UBXN6Q9BZV1 441 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ACP6Q9NPH0 428 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 XPNPEP1Q9NQW7 623 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 LYARQ9NX58 379 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 WRAP73Q9P2S5 460 aaPredicted RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 GHRLQ9UBU3 117 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 TRBV9A0A0B4J1U6 114 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 IGSF6O95976 241 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 GPIP06744 558 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 CD3GP09693 182 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 SPAM1P38567 509 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 CDH11P55287 796 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ZP1P60852 638 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms