RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 MYDGFQ969H8 173 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 SLC25A44Q96H78 314 aaPredicted RBP9.07□□□□□ -0.96
USP39-215ENST00000481409 Q96M85 177 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 ZFP3Q96NJ6 502 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 RBP7Q96R05 134 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 IL4I1Q96RQ9 567 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 DDOQ99489 341 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 SLX1AQ9BQ83 275 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 SRXN1Q9BYN0 137 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 PRRG4Q9BZD6 226 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 NMNAT2Q9BZQ4 307 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 BCO1Q9HAY6 547 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 ZNF71Q9NQZ8 489 aaPredicted RBP9.07□□□□□ -0.96
USP39-215ENST00000481409 RASSF1Q9NS23 344 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 SPRR3Q9UBC9 169 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 IL20RAQ9UHF4 553 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 ADAM18Q9Y3Q7 739 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 LIPGQ9Y5X9 500 aa9.07□□□□□ -0.96
USP39-215ENST00000481409 CD8B2A6NJW9 211 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 FIGNL2A6NMB9 653 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 ZNF716A6NP11 495 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 OPN1LWP04000 364 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 HOXB1P14653 301 aaPredicted RBP9.06□□□□□ -0.96
USP39-215ENST00000481409 IFNGR1P15260 489 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 PTGS2P35354 604 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 SLC15A1P46059 708 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 CDH11P55287 796 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 TUBA4AP68366 448 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 SRYQ05066 204 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 RBPJQ06330 500 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 RASGEF1BQ0VAM2 473 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 RAB40BQ12829 278 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 CRMP1Q14194 572 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 PON3Q15166 354 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 MESTQ5EB52 335 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 SLC35F1Q5T1Q4 408 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 RNLSQ5VYX0 342 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 LEG1Q6P5S2 330 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 MEPCEQ7L2J0 689 aaKnown RBP9.06□□□□□ -0.96
USP39-215ENST00000481409 GPAT4Q86UL3 456 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 ZBTB46Q86UZ6 589 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 IGFN1Q86VF2 1251 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 CPOQ8IVL8 374 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 CCDC103Q8IW40 242 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 MCEMP1Q8IX19 187 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 POMGNT2Q8NAT1 580 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 OR4K13Q8NH42 304 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 CNIH3Q8TBE1 160 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 APH1BQ8WW43 257 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 WNT2BQ93097 391 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 RNF166Q96A37 237 aaPredicted RBP9.06□□□□□ -0.96
USP39-215ENST00000481409 ZNF582Q96NG8 517 aaPredicted RBP9.06□□□□□ -0.96
USP39-215ENST00000481409 KCNK17Q96T54 332 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 MNTQ99583 582 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 MRPL13Q9BYD1 178 aaKnown RBP9.06□□□□□ -0.96
USP39-215ENST00000481409 RACGAP1Q9H0H5 632 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 DUSP21Q9H596 190 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 HINT3Q9NQE9 182 aaKnown RBP9.06□□□□□ -0.96
USP39-215ENST00000481409 KLHL13Q9P2N7 655 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 SEC14L4Q9UDX3 406 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 PSORS1C1Q9UIG5 152 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 CAMK2AQ9UQM7 478 aa9.06□□□□□ -0.96
USP39-215ENST00000481409 A0A087WXM4 84 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 A0A1B0GTH9 108 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 SLC22A20A6NK97 555 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 ARHGEF9O43307 516 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 FAM20BO75063 409 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 ENTPD6O75354 484 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 SLC43A1O75387 559 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 TRMUO75648 421 aaKnown RBP9.05□□□□□ -0.96
USP39-215ENST00000481409 ZNF432O94892 652 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 CRHP06850 196 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 YES1P07947 543 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 LYNP07948 512 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 HLA-DOBP13765 273 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 EDN3P14138 238 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 SLC2A5P22732 501 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 DCKP27707 260 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 CDKN2AP42771 156 aaKnown RBP9.05□□□□□ -0.96
USP39-215ENST00000481409 CAPZA2P47755 286 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 MTNR1AP48039 350 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 TDGF1P3P51864 188 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 ZNF133P52736 654 aaPredicted RBP9.05□□□□□ -0.96
USP39-215ENST00000481409 BIDP55957 195 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 SLC35A2P78381 396 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 GGTLC2Q14390 218 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 HIST3H3Q16695 136 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 GXYLT1Q4G148 440 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 RIPPLY2Q5TAB7 128 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 NSUN5P2Q63ZY6 315 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 NIPAL3Q6P499 406 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 PLBD1Q6P4A8 553 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 ZNF540Q8NDQ6 660 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 SDR9C7Q8NEX9 313 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 BPIFB6Q8NFQ5 453 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 FAM57AQ8TBR7 257 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 PTP4A1Q93096 173 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 UBE2FQ969M7 185 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 RASD2Q96D21 266 aa9.05□□□□□ -0.96
USP39-215ENST00000481409 GMPPAQ96IJ6 420 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms