RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 RAP1BP61224 184 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 LCN6P62502 163 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 RAP1AP62834 184 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 RUNX1T1Q06455 604 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 RASGEF1BQ0VAM2 473 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 DBPQ10586 325 aaPredicted RBP15.66■□□□□ 0.1
UPF3A-206ENST00000480362 EEF1A1P5Q5VTE0 462 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 NXNL2Q5VZ03 156 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 FAM205BPQ63HN1 556 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 FGD2Q7Z6J4 655 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 WDFY1Q8IWB7 410 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 FNDC9Q8TBE3 224 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF566Q969W8 418 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 TPRKBQ9Y3C4 175 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 SLC35F4A4IF30 521 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 MAGEA13PA6NCF6 341 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 CLCA1A8K7I4 914 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 PTGES3LE9PB15 166 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 PRODHO43272 600 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 TRMUO75648 421 aaKnown RBP15.65■□□□□ 0.1
UPF3A-206ENST00000480362 CLUP10909 449 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 CDH11P55287 796 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 KLHL12Q53G59 568 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 ADCK1Q86TW2 530 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 OR5M9Q8NGP3 310 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 OR9Q1Q8NGQ5 310 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 OR6X1Q8NH79 312 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 ABHD3Q8WU67 409 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 SNRNP40Q96DI7 357 aaKnown RBP15.65■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF385AQ96PM9 386 aaKnown RBP15.65■□□□□ 0.1
UPF3A-206ENST00000480362 SNX18Q96RF0 628 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 NMNAT2Q9BZQ4 307 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 OR51V1Q9H2C8 321 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF696Q9H7X3 374 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 BLOC1S6Q9UL45 172 aa15.65■□□□□ 0.1
UPF3A-206ENST00000480362 RPL36Q9Y3U8 105 aaKnown RBP15.65■□□□□ 0.1
UPF3A-206ENST00000480362 PRSS37A4D1T9 235 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 EIF4E1BA6NMX2 242 aaKnown RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 SNTNA6NMZ2 147 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 ZNF726A6NNF4 738 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 M0R3G1 203 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 ERVH48-1M5A8F1 160 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 AQP8O94778 261 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 EEF1B2P24534 225 aaKnown RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 PTGS2P35354 604 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 SLC25A1P53007 311 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 SLC16A1P53985 500 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 CAMK2DQ13557 499 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 APOFQ13790 326 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 LY6DQ14210 128 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 KCTD21Q4G0X4 260 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 NIPAL3Q6P499 406 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 MEPCEQ7L2J0 689 aaKnown RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 GID4Q8IVV7 300 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 ZIC4Q8N9L1 334 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 ZNF540Q8NDQ6 660 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 RNF128Q8TEB7 428 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 GGHQ92820 318 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 RFKQ969G6 155 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 ZNF775Q96BV0 537 aaPredicted RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 ADAD1Q96M93 576 aaKnown RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 CNTNAP3BQ96NU0 1288 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 RHNO1Q9BSD3 238 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 CNTNAP3Q9BZ76 1288 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 SRA1Q9HD15 236 aaKnown RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 RPRD1BQ9NQG5 326 aaKnown RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 VSX1Q9NZR4 365 aaPredicted RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 PSORS1C1Q9UIG5 152 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 ING1Q9UK53 422 aaPredicted RBP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.64■□□□□ 0.09
UPF3A-206ENST00000480362 FLVCR1Q9Y5Y0 555 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 DNAJC13O75165 2243 aa15.64■□□□□ 0.09
UPF3A-206ENST00000480362 CFAP47Q6ZTR5 3102 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 SLC22A23A1A5C7 686 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 SLC22A20A6NK97 555 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 AHRRA9YTQ3 701 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 GYPBP06028 91 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 DBTP11182 482 aaKnown RBP15.63■□□□□ 0.09
UPF3A-206ENST00000480362 SPI1P17947 270 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 SLC2A5P22732 501 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 HTR1FP30939 366 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 TDGF1P3P51864 188 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 ZNF91Q05481 1191 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 PRR30Q53SZ7 412 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-206ENST00000480362 CARD17Q5XLA6 110 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 HDDC2Q7Z4H3 204 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 SYT14Q8NB59 555 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 SGCDQ92629 289 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 SLC25A44Q96H78 314 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-206ENST00000480362 TSSK2Q96PF2 358 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 KCNK17Q96T54 332 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 TEAD3Q99594 435 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 MRPL13Q9BYD1 178 aaKnown RBP15.63■□□□□ 0.09
UPF3A-206ENST00000480362 SYT4Q9H2B2 425 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 DUSP21Q9H596 190 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 ASF1BQ9NVP2 202 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 PAK1IP1Q9NWT1 392 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-206ENST00000480362 ASB6Q9NWX5 421 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 ZNF175Q9Y473 711 aa15.63■□□□□ 0.09
UPF3A-206ENST00000480362 ANKRD11Q6UB99 2663 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms