RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 CCDC28BQ9BUN5 200 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 EMC6Q9BV81 110 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 LINC00470Q9BZP3 86 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 OR51B6Q9H340 312 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 TPK1Q9H3S4 243 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 NARFLQ9H6Q4 476 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 EVA1AQ9H8M9 152 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 C12orf10Q9HB07 376 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 CDH20Q9HBT6 801 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 NPHS2Q9NP85 383 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 SLCO1B3Q9NPD5 702 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 NANSQ9NR45 359 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 MED29Q9NX70 200 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 SEC14L4Q9UDX3 406 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 DUSP13Q9UII6 198 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 NDUFAF1Q9Y375 327 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 MALRD1Q5VYJ5 2156 aa6.15□□□□□ -1.43
COL17A1-205ENST00000480127 DSPPQ9NZW4 1301 aa6.15□□□□□ -1.43
COL17A1-205ENST00000480127 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 A0A087WUJ7 227 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 IGHV2OR16-5A0A0B4J2B6 119 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 IQCMA0A1B0GVH7 501 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 A0A1W2PRG6 482 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 HMGB1P1B2RPK0 211 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 TMEM229AB2RXF0 380 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 BLOC1S5-TXNDC5H3BN57 136 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 M0R3H8 397 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 TCF21O43680 179 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 TPST2O60704 377 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 PDE5AO76074 875 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 UBL3O95164 117 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 CH25HO95992 272 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 BCL10O95999 233 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 IFNA14P01570 189 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 LCKP06239 509 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 CELA3BP08861 270 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 TROVE2P10155 538 aaKnown RBP eCLIP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 CBR1P16152 277 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 EGR1P18146 543 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 TCN1P20061 433 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 CCNOP22674 350 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 THBS4P35443 961 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 GIPRP48546 466 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 PPOXP50336 477 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 CDH12P55289 794 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 BIDP55957 195 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 MTPNP58546 118 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 TAS2R41P59536 307 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 PLAURQ03405 335 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 HSF2Q03933 536 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 CYLC2Q14093 348 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 CR1LQ2VPA4 569 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 TNFAIP8L3Q5GJ75 292 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 SWT1Q5T5J6 900 aaKnown RBP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 UGT2A3Q6UWM9 527 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 C12orf54Q6X4T0 127 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 DEF8Q6ZN54 512 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 MAVSQ7Z434 540 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 PATL1Q86TB9 770 aaKnown RBP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 ANKK1Q8NFD2 765 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 MAGEE2Q8TD90 523 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 RASSF5Q8WWW0 418 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF566Q969W8 418 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 TLCD1Q96CP7 247 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 SH3GL1Q99961 368 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 SYT3Q9BQG1 590 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 EBF4Q9BQW3 602 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 BPESC1Q9GZL8 116 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 OCEL1Q9H607 264 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 KLHL14Q9P2G3 628 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 REV1Q9UBZ9 1251 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 FBXL3Q9UKT7 428 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF346Q9UL40 294 aaKnown RBP6.14□□□□□ -1.43
COL17A1-205ENST00000480127 FZR1Q9UM11 496 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 MEGF8Q7Z7M0 2845 aa6.14□□□□□ -1.43
COL17A1-205ENST00000480127 LRP5LA4QPB2 252 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 TRAPPC13A5PLN9 417 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 M0QX08 132 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 GSTA4O15217 222 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 PPIHO43447 177 aaKnown RBP6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SYNGR3O43761 229 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 MT-ATP6P00846 226 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 PTHP01270 115 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 IGHG1P01857 330 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF23P17027 643 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 HTR2AP28223 471 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 CALCRP30988 508 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 APLNRP35414 380 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 GPR6P46095 362 aaPredicted RBP6.13□□□□□ -1.43
COL17A1-205ENST00000480127 ATP4BP51164 291 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 MVDP53602 400 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 RAB1AP62820 205 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 CD47Q08722 323 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 RBBP4Q09028 425 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SF3A3Q12874 501 aaKnown RBP eCLIP6.13□□□□□ -1.43
COL17A1-205ENST00000480127 TAF11Q15544 211 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 MAPK11Q15759 364 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SWI5Q1ZZU3 235 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 TBC1D28Q2M2D7 210 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms