RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 LHX6Q9UPM6 363 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 TMEM72A0PK05 275 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 RFPL4AA6NLU0 287 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 RFPL4AL1F8VTS6 287 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 SMAD6O43541 496 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 B3GALNT1O75752 331 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 CYBAP13498 195 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 SNCAP37840 140 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 UBE2NP61088 152 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC35A1P78382 337 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 CAMK2BQ13554 666 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 PNLIPRP3Q17RR3 467 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 ISXQ2M1V0 245 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC25A30Q5SVS4 291 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 LIPNQ5VXI9 398 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 OR7E24Q6IFN5 339 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 TTLL10Q6ZVT0 673 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 USP53Q70EK8 1073 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 GRASPQ7Z6J2 395 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 VRK3Q8IV63 474 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 MCATQ8IVS2 390 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 KLK6Q92876 244 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 NIPSNAP1Q9BPW8 284 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 SUCNR1Q9BXA5 334 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 PLEKHF2Q9H8W4 249 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 NSG2Q9Y328 171 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 KNDC1Q76NI1 1749 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 IFT172Q9UG01 1749 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 XRN1Q8IZH2 1706 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 A0A1W2PP55 124 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 ANKRD30BLA7E2S9 258 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 IQCF3P0C7M6 154 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 EGR3Q06889 387 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 C17orf67Q0P5P2 114 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 TAF9Q16594 264 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 FAM26DQ5JW98 314 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 ADAM5Q6NVV9 412 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 BRICD5Q6PL45 260 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 PARS2Q7L3T8 475 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 DOK3Q7L591 496 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 GRINAQ7Z429 371 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 HSD11B1LQ7Z5J1 315 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF100Q8IYN0 542 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 OR10R2Q8NGX6 335 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 NXPE3Q969Y0 559 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 TXN2Q99757 166 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 RTP3Q9BQQ7 232 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 MCTS1Q9ULC4 181 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 MEIKINA0A087WXM9 373 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 ACOD1A6NK06 481 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 FAM183AA6NL82 134 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 C4orf47A7E2U8 309 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 H2AFB1P0C5Y9 115 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 DUSP8Q13202 625 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 SURF2Q15527 256 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 RPE65Q16518 533 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 LEXMQ3ZCV2 418 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 GDF7Q7Z4P5 450 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 ADGRG3Q86Y34 549 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 HGDQ93099 445 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 TMEM18Q96B42 140 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 SCLYQ96I15 445 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 JSRP1Q96MG2 331 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 CIB3Q96Q77 187 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 OR2A14Q96R47 310 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 OR1F2PQ96R84 312 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 GAS2L1Q99501 681 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 OR11A1Q9GZK7 315 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 HINT3Q9NQE9 182 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 LYRM2Q9NU23 88 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 SIRT5Q9NXA8 310 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 MRPL15Q9P015 296 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 A6NLC8 198 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF93P35789 620 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 TNK1Q13470 666 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 EXOSC2Q13868 293 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 NFATC4Q14934 902 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 OR10K2Q6IF99 312 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 C19orf35Q6ZS72 473 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 TMEM25Q86YD3 366 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 CD99L2Q8TCZ2 262 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 CPNE4Q96A23 557 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 TM4SF18Q96CE8 201 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 NTNG2Q96CW9 530 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 TNFRSF13CQ96RJ3 184 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 TMPRSS5Q9H3S3 457 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 GLIPR2Q9H4G4 154 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 MYO5BQ9ULV0 1848 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC17A2O00624 439 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 FBXO24O75426 580 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 ZP3P21754 424 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 IGFBP4P22692 258 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 PER3P56645 1201 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 MRPS21P82921 87 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 CCL14Q16627 93 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC22A6Q4U2R8 563 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 C12orf73Q69YU5 71 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 ZDHHC22Q8N966 263 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 GJC3Q8NFK1 279 aa5.68□□□□□ -1.5
PRPF4B-205ENST00000480058 SEMA6DQ8NFY4 1073 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms