RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 SLC35G6P0C7Q6 338 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 ACAA2P42765 397 aaKnown RBP18.88■□□□□ 0.61
COL13A1-208ENST00000479733 LCN6P62502 163 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 FAM53BQ14153 422 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 IRF4Q15306 451 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 NNATQ16517 81 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 FAM220AQ7Z4H9 259 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 BIVMQ86UB2 503 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 STEAP2Q8NFT2 490 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 LCN9Q8WX39 176 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 SUSD6Q92537 303 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 MRPL48Q96GC5 212 aaKnown RBP18.88■□□□□ 0.61
COL13A1-208ENST00000479733 ZMAT3Q9HA38 289 aaKnown RBP18.88■□□□□ 0.61
COL13A1-208ENST00000479733 MYEF2Q9P2K5 600 aaKnown RBP18.88■□□□□ 0.61
COL13A1-208ENST00000479733 MRM2Q9UI43 246 aaKnown RBP18.88■□□□□ 0.61
COL13A1-208ENST00000479733 DAPP1Q9UN19 280 aa18.88■□□□□ 0.61
COL13A1-208ENST00000479733 MRPS2Q9Y399 296 aaKnown RBP18.88■□□□□ 0.61
COL13A1-208ENST00000479733 CEBPBP17676 345 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 TSFMP43897 325 aaKnown RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 CBX5P45973 191 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 LY6G6FQ5SQ64 297 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 ZNF425Q6IV72 752 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 LIN54Q6MZP7 749 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 ZNF227Q86WZ6 799 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 C12orf45Q8N5I9 185 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 LILRB1Q8NHL6 650 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 LMF1Q96S06 567 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 BARX1Q9HBU1 254 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 DEC1Q9P2X7 70 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 LHX6Q9UPM6 363 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 CACNA1IQ9P0X4 2223 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 MPTX1A8MV57 137 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 CTAG2O75638 210 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 OR4E1P0C645 316 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 UBBP0CG47 229 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 UBCP0CG48 685 aaKnown RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 CDKN2AP42771 156 aaKnown RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 RPS27AP62979 156 aaKnown RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 UBA52P62987 128 aaKnown RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 ALKBH1Q13686 389 aaKnown RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 SERTAD2Q14140 314 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 GUCA2BQ16661 112 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 STEAP1BQ6NZ63 245 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 HAGHLQ6PII5 290 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 C10orf53Q8N6V4 93 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 WFIKKN2Q8TEU8 576 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 DNAJA3Q96EY1 480 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 VRK1Q99986 396 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 DUSP22Q9NRW4 184 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 C14orf105Q9NVL8 296 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 ETV7Q9Y603 341 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 OR5H14A6NHG9 310 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 B3GALT2O43825 422 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 FHL5Q5TD97 284 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 NKAIN2Q5VXU1 208 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 USP53Q70EK8 1073 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 OR2W3Q7Z3T1 314 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 PUSL1Q8N0Z8 303 aaKnown RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 RAB11FIP5Q9BXF6 653 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 MKKSQ9NPJ1 570 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-208ENST00000479733 ASF1BQ9NVP2 202 aa18.87■□□□□ 0.61
COL13A1-208ENST00000479733 FAM25EA8MYX2 175 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 F12P00748 615 aaPredicted RBP18.86■□□□□ 0.61
COL13A1-208ENST00000479733 CD1AP06126 327 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 PRSS3P35030 304 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 POU3F4P49335 361 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 OR1S2Q8NGQ3 325 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 C15orf40Q8WUR7 153 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 RSPRY1Q96DX4 576 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 LMAN2LQ9H0V9 348 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 SERGEFQ9UGK8 458 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 GTF2A1LQ9UNN4 478 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 FARSAQ9Y285 508 aaKnown RBP18.86■□□□□ 0.61
COL13A1-208ENST00000479733 COL4A6Q14031 1691 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 C1QTNF3-AMACRE9PGA6 284 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 EIF4E2O60573 245 aaKnown RBP18.86■□□□□ 0.61
COL13A1-208ENST00000479733 MAOBP27338 520 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 PGDP52209 483 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 SRSF5Q13243 272 aaKnown RBP18.86■□□□□ 0.61
COL13A1-208ENST00000479733 SCGB2B2Q4G0G5 96 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 FBXO42Q6P3S6 717 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 UNQ6126/PRO20091Q6UXV3 157 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 CCDC74AQ96AQ1 378 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 VWCEQ96DN2 955 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 ATG5Q9H1Y0 275 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 STEAP1Q9UHE8 339 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 ATG2BQ96BY7 2078 aa18.86■□□□□ 0.61
COL13A1-208ENST00000479733 KNL1Q8NG31 2342 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 LINC01387J3KSC0 135 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 KCNJ13O60928 360 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 SLC25A12O75746 678 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 ATG12O94817 140 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 GPANK1O95872 356 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 EIF2B5Q13144 721 aaKnown RBP18.85■□□□□ 0.61
COL13A1-208ENST00000479733 MOB3CQ70IA8 216 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 OR5T2Q8NGG2 359 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 OR1J2Q8NGS2 313 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 TINAGL1Q9GZM7 467 aaPredicted RBP18.85■□□□□ 0.61
COL13A1-208ENST00000479733 SCPEP1Q9HB40 452 aa18.85■□□□□ 0.61
COL13A1-208ENST00000479733 DNAJB12Q9NXW2 375 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms