RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 CRLF1O75462 422 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 OR5F1O95221 314 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 OR4A8P0C604 315 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 HLA-DOBP13765 273 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 CAPZA2P47755 286 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 CSNK1A1P48729 337 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 PPOXP50336 477 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 GSG1Q2KHT4 349 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 MST1LQ2TV78 715 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 NRN1LQ496H8 165 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 RABL3Q5HYI8 236 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 REP15Q6BDI9 236 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 ZNF813Q6ZN06 617 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 PIWIL3Q7Z3Z3 882 aaKnown RBP13.08□□□□□ -0.32
PRKN-207ENST00000479615 ARPINQ7Z6K5 226 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 DPPA2Q7Z7J5 298 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 ZNF540Q8NDQ6 660 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 VANGL1Q8TAA9 524 aaPredicted RBP13.08□□□□□ -0.32
PRKN-207ENST00000479615 ZNF566Q969W8 418 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 TXNDC15Q96J42 360 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 TNFRSF13CQ96RJ3 184 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 EMC6Q9BV81 110 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 RAB1BQ9H0U4 201 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 PLK3Q9H4B4 646 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 MED29Q9NX70 200 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 STX18Q9P2W9 335 aaKnown RBP13.08□□□□□ -0.32
PRKN-207ENST00000479615 SH3GLB1Q9Y371 365 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 CAPN7Q9Y6W3 813 aa13.08□□□□□ -0.32
PRKN-207ENST00000479615 FN1P02751 2386 aaKnown RBP13.08□□□□□ -0.32
PRKN-207ENST00000479615 TLN2Q9Y4G6 2542 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 IGHV4-30-2A0A087WSY4 118 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 LOC100653049A0A140TA62 436 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 FXYD1O00168 92 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 NDUFAB1O14561 156 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 KRT34O76011 436 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 UBL3O95164 117 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 LYPD3O95274 346 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 CH25HO95992 272 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 MT-ND1P03886 318 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 ASAH2BP0C7U1 165 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 IFNGR1P15260 489 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 NPR2P20594 1047 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 EVX1P49640 407 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 PDLIM4P50479 330 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 IDH3GP51553 393 aaPredicted RBP13.07□□□□□ -0.32
PRKN-207ENST00000479615 BIDP55957 195 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 TAS2R41P59536 307 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 TUBA1BP68363 451 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 TUBA4AP68366 448 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 CAMK2DQ13557 499 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 ADIPOQQ15848 244 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 CARD17Q5XLA6 110 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 TUBA1AQ71U36 451 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 SLC35D2Q76EJ3 337 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 SLC46A3Q7Z3Q1 461 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 CARM1Q86X55 608 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 RBM45Q8IUH3 476 aaKnown RBP13.07□□□□□ -0.32
PRKN-207ENST00000479615 RP9Q8TA86 221 aaKnown RBP13.07□□□□□ -0.32
PRKN-207ENST00000479615 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 C10orf82Q8WW14 230 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 LZICQ8WZA0 190 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 ZNF837Q96EG3 531 aaPredicted RBP13.07□□□□□ -0.32
PRKN-207ENST00000479615 SLC25A44Q96H78 314 aaPredicted RBP13.07□□□□□ -0.32
PRKN-207ENST00000479615 ZNF583Q96ND8 569 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 FOXB1Q99853 325 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 B3GNT2Q9NY97 397 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 TAS2R5Q9NYW4 299 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 GLTPQ9NZD2 209 aa13.07□□□□□ -0.32
PRKN-207ENST00000479615 HEATR1Q9H583 2144 aaKnown RBP13.06□□□□□ -0.32
PRKN-207ENST00000479615 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 FAM220BPB1ANY3 271 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 LRRN3E7EW58 273 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 CCDC22O60826 627 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 FARS2O95363 451 aaKnown RBP13.06□□□□□ -0.32
PRKN-207ENST00000479615 RAB36O95755 333 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 BCL10O95999 233 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 THY1P04216 161 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 UMPSP11172 480 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 NR2C1P13056 603 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 LSP1P33241 339 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 VLDLRP98155 873 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 KRTAP1-1Q07627 177 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 NPRL3Q12980 569 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 PHYHD1Q5SRE7 291 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 WDR88Q6ZMY6 472 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 NANOGNBQ7Z5D8 188 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 MDP1Q86V88 176 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 ZNF525Q8N782 197 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 OR2T12Q8NG77 320 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 OR4D11Q8NGI4 311 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 NEU4Q8WWR8 484 aaPredicted RBP13.06□□□□□ -0.32
PRKN-207ENST00000479615 LIPHQ8WWY8 451 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 TMEM54Q969K7 222 aa13.06□□□□□ -0.32
PRKN-207ENST00000479615 LOC390937A0A1W2PQ73 354 aa13.05□□□□□ -0.32
PRKN-207ENST00000479615 A0A1W2PRG6 482 aa13.05□□□□□ -0.32
PRKN-207ENST00000479615 C11orf98E9PRG8 122 aa13.05□□□□□ -0.32
PRKN-207ENST00000479615 IGHG1P01857 330 aa13.05□□□□□ -0.32
PRKN-207ENST00000479615 OR8G3PP0DMU2 310 aa13.05□□□□□ -0.32
PRKN-207ENST00000479615 CD79AP11912 226 aa13.05□□□□□ -0.32
PRKN-207ENST00000479615 USF1P22415 310 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms