RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TCEAL6Q6IPX3 200 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 OR4K17Q8NGC6 315 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 OR52L1Q8NGH7 329 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 ATG101Q9BSB4 218 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 ZCCHC3Q9NUD5 404 aaKnown RBP19.4■□□□□ 0.7
SDF4-206ENST00000478938 SLC45A1Q9Y2W3 748 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 IGLV3-16A0A075B6K0 115 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 M0QYG6 137 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 BCAT2O15382 392 aaPredicted RBP19.4■□□□□ 0.7
SDF4-206ENST00000478938 PAPLNO95428 1278 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 IFNA10P01566 189 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 IFNA17P01571 189 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 PRKCZQ05513 592 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 VGLL4Q14135 290 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 PDZD11Q5EBL8 140 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 UNQ9370/PRO34162Q6UXP9 181 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 THSD4Q6ZMP0 1018 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 FRRS1Q6ZNA5 592 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 AVL9Q8NBF6 648 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 DCUN1D4Q92564 292 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 MALSU1Q96EH3 234 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 SLC41A3Q96GZ6 507 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 MYADMQ96S97 322 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 C19orf43Q9BQ61 176 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 ZNF559Q9BR84 538 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 TAS2R8Q9NYW2 309 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 SLC23A2Q9UGH3 650 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 UNC119BA6NIH7 251 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 EEF1E1-BLOC1S5C9J1V9 151 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 MAN2B1O00754 1011 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 ADAMTS4O75173 837 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 CALCBP10092 127 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 NAA10P41227 235 aaPredicted RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 PCBP4P57723 403 aaKnown RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 NUTF2P61970 127 aaKnown RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 ACY1Q03154 408 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 LTBQ06643 244 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 CRMP1Q14194 572 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 LRRC73Q5JTD7 316 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 ATPAF1Q5TC12 328 aaPredicted RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 PAPD4Q6PIY7 484 aaKnown RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 ZNF574Q6ZN55 896 aaPredicted RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 DND1Q8IYX4 353 aaKnown RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 CBARPQ8N350 705 aaPredicted RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 ZMYND19Q96E35 227 aaPredicted RBP19.39■□□□□ 0.7
SDF4-206ENST00000478938 ATG4BQ9Y4P1 393 aa19.39■□□□□ 0.7
SDF4-206ENST00000478938 SYNDIG1LA6NDD5 238 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 AGERQ15109 404 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 LPCAT3Q6P1A2 487 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 DRAM2Q6UX65 266 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 ANGPTL5Q86XS5 388 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 OR51L1Q8NGJ5 315 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 C15orf40Q8WUR7 153 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 ARHGDIGQ99819 225 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 SLC7A7Q9UM01 511 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 XRCC3O43542 346 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 MBP02144 154 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 EFNB2P52799 333 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 LASP1Q14847 261 aaKnown RBP19.39■□□□□ 0.69
SDF4-206ENST00000478938 AMZ1Q400G9 498 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 OR56B1Q8NGI3 324 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 ZBTB8AQ96BR9 441 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 RRNAD1Q96FB5 475 aaKnown RBP19.39■□□□□ 0.69
SDF4-206ENST00000478938 TUBA4BQ9H853 241 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 OR2S2Q9NQN1 319 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 CSAG2Q9Y5P2 127 aa19.39■□□□□ 0.69
SDF4-206ENST00000478938 KLKB1P03952 638 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 FCGR3AP08637 254 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 NPPBP16860 134 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 ADRA2CP18825 462 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 SLC2A5P22732 501 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 DLK2Q6UY11 383 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 TMPRSS12Q86WS5 348 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 TM4SF18Q96CE8 201 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 SUSD3Q96L08 255 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 MCHR1Q99705 422 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 BCL2L10Q9HD36 194 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 CMC2Q9NRP2 79 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 TMEM184BQ9Y519 407 aaPredicted RBP19.38■□□□□ 0.69
SDF4-206ENST00000478938 KPTNQ9Y664 436 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 TEX13DA0A0J9YY54 714 aaPredicted RBP19.38■□□□□ 0.69
SDF4-206ENST00000478938 FAM86C2PA6NEL3 165 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 PSMD9O00233 223 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 PLPP1O14494 284 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 FBXO24O75426 580 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 MED6O75586 246 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 MAKP20794 623 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 RGS8P57771 180 aaPredicted RBP19.38■□□□□ 0.69
SDF4-206ENST00000478938 ACTC1P68032 377 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 ACTA1P68133 377 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 LBHQ53QV2 105 aaPredicted RBP19.38■□□□□ 0.69
SDF4-206ENST00000478938 TTLL10Q6ZVT0 673 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 CLEC1AQ8NC01 280 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 FBXO22Q8NEZ5 403 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 ELF4Q99607 663 aaPredicted RBP19.38■□□□□ 0.69
SDF4-206ENST00000478938 DOK5Q9P104 306 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 UPB1Q9UBR1 384 aa19.38■□□□□ 0.69
SDF4-206ENST00000478938 GDF2Q9UK05 429 aaPredicted RBP19.38■□□□□ 0.69
SDF4-206ENST00000478938 TRAV18A0A075B6X5 111 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 PRAMEF26H0Y7S4 382 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms