RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ZFAND3Q9H8U3 227 aa9.03□□□□□ -0.96
HDAC6-222ENST00000478095 INIPQ9NRY2 104 aa9.03□□□□□ -0.96
HDAC6-222ENST00000478095 RASSF1Q9NS23 344 aa9.03□□□□□ -0.96
HDAC6-222ENST00000478095 ZNF226Q9NYT6 803 aa9.03□□□□□ -0.96
HDAC6-222ENST00000478095 HIF3AQ9Y2N7 669 aa9.03□□□□□ -0.96
HDAC6-222ENST00000478095 HCFC1P51610 2035 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 NBPF19A0A087WUL8 3843 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 DHRS12A0PJE2 317 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 SH3PXD2BA1X283 911 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 OR6C65A6NJZ3 312 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 OR5H1A6NKK0 313 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 AQP12BA6NM10 295 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF726A6NNF4 738 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 DEFB108AA8MXU0 73 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 MCIDASD6RGH6 385 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 TNFRSF11BO00300 401 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 CLOCKO15516 846 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 BCL10O95999 233 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 HRGP04196 525 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.97
HDAC6-222ENST00000478095 CRYGSP22914 178 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 OMPP47874 163 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 LIMS1P48059 325 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 SMIM11AP58511 58 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 RPS4XP62701 263 aaKnown RBP9.02□□□□□ -0.97
HDAC6-222ENST00000478095 RUNX1T1Q06455 604 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 FHL1Q13642 323 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 GABRA6Q16445 453 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 ACKR1Q16570 336 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 HIKESHIQ53FT3 197 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 ALG10Q5BKT4 473 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 HMBOX1Q6NT76 420 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 CCDC121Q6ZUS5 278 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 PIWIL3Q7Z3Z3 882 aaKnown RBP9.02□□□□□ -0.97
HDAC6-222ENST00000478095 ABHD12BQ7Z5M8 362 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-222ENST00000478095 AQP12AQ8IXF9 295 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 C20orf196Q8IYI0 205 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 CANT1Q8WVQ1 401 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 NRGNQ92686 78 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF837Q96EG3 531 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-222ENST00000478095 LURAP1Q96LR2 239 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 TNFRSF13CQ96RJ3 184 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 GPA33Q99795 319 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 CHID1Q9BWS9 393 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 ULBP2Q9BZM5 246 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 LINC00470Q9BZP3 86 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 OR10A4Q9H209 315 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 LRMDAQ9H2I8 198 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 CRLF2Q9HC73 371 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 PGPEP1Q9NXJ5 209 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 VNN3Q9NY84 501 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 TMEM5Q9Y2B1 443 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 U3KQV3 271 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 ANKHD1Q8IWZ3 2542 aaKnown RBP9.02□□□□□ -0.97
HDAC6-222ENST00000478095 PKDREJQ9NTG1 2253 aa9.02□□□□□ -0.97
HDAC6-222ENST00000478095 A0A096LPE4 126 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-222ENST00000478095 A0A1W2PPR1 153 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 A0A1W2PPZ6 126 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 FAM221AA4D161 298 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 HTR3EA5X5Y0 456 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 KLF4O43474 513 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 OR10H3O60404 316 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 TSPAN19P0C672 248 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 RAP2AP10114 183 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF26P17031 533 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-222ENST00000478095 CSNK1A1P48729 337 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 DAP3P51398 398 aaKnown RBP9.01□□□□□ -0.97
HDAC6-222ENST00000478095 CTXN1P60606 82 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 ARF1P84077 181 aaKnown RBP9.01□□□□□ -0.97
HDAC6-222ENST00000478095 TGFBR3Q03167 851 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 PPA1Q15181 289 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 CEACAM16Q2WEN9 425 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 TIMM23BQ5SRD1 257 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 SEZ6L2Q6UXD5 910 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 TMPRSS11FQ6ZWK6 438 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 ZER1Q7Z7L7 766 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 CDC20BQ86Y33 519 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 WDR31Q8NA23 367 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 OR9Q2Q8NGE9 314 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 OR4C15Q8NGM1 316 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 OR1K1Q8NGR3 316 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 OR6X1Q8NH79 312 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 ASB10Q8WXI3 467 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 HSD17B8Q92506 261 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF566Q969W8 418 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 MUCL1Q96DR8 90 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 RSRC1Q96IZ7 334 aaKnown RBP9.01□□□□□ -0.97
HDAC6-222ENST00000478095 ADAD1Q96M93 576 aaKnown RBP9.01□□□□□ -0.97
HDAC6-222ENST00000478095 MUS81Q96NY9 551 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 OCSTAMPQ9BR26 566 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 C1QTNF6Q9BXI9 259 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 GPR35Q9HC97 309 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 KRCC1Q9NPI7 259 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-222ENST00000478095 NPAP1Q9NZP6 1156 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 IL20RAQ9UHF4 553 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 TMCC3Q9ULS5 477 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 LYVE1Q9Y5Y7 322 aa9.01□□□□□ -0.97
HDAC6-222ENST00000478095 CELSR2Q9HCU4 2923 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms