RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SMURF2Q9HAU4 748 aa14□□□□□ -0.17
COPS3-207ENST00000477299 PARPBPQ9NWS1 579 aa14□□□□□ -0.17
COPS3-207ENST00000477299 REV1Q9UBZ9 1251 aa14□□□□□ -0.17
COPS3-207ENST00000477299 PKDREJQ9NTG1 2253 aa14□□□□□ -0.17
COPS3-207ENST00000477299 A0A1W2PRG6 482 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 M0R3G1 203 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 MITFO75030 526 aaPredicted RBP13.99□□□□□ -0.17
COPS3-207ENST00000477299 LYZL6O75951 148 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 NDUFB2O95178 105 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 PPP1R3DO95685 299 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 BCL10O95999 233 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 HOXB6P17509 224 aaKnown RBP13.99□□□□□ -0.17
COPS3-207ENST00000477299 RPL4P36578 427 aaKnown RBP13.99□□□□□ -0.17
COPS3-207ENST00000477299 CD79BP40259 229 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 MYBPC1Q00872 1141 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 RFX4Q33E94 735 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 LINC00471Q8N535 108 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 SYT14Q8NB59 555 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 ICA1LQ8NDH6 482 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 HDAC2Q92769 488 aaKnown RBP13.99□□□□□ -0.17
COPS3-207ENST00000477299 RASD2Q96D21 266 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 CENPNQ96H22 339 aaPredicted RBP13.99□□□□□ -0.17
COPS3-207ENST00000477299 ALKBH3Q96Q83 286 aaPredicted RBP13.99□□□□□ -0.17
COPS3-207ENST00000477299 SLCO5A1Q9H2Y9 848 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 TXNIPQ9H3M7 391 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 MGAT4BQ9UQ53 548 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 IER3IP1Q9Y5U9 82 aa13.99□□□□□ -0.17
COPS3-207ENST00000477299 IGKV1D-43A0A0B4J1Z2 117 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 ZNF726A6NNF4 738 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 H7C1C5 153 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 TRMUO75648 421 aaKnown RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 CD14P08571 375 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 ITGA5P08648 1049 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 CDH2P19022 906 aaPredicted RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 ACVR1BP36896 505 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 IFNGR2P38484 337 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 PRPS1P60891 318 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 RPL27P61353 136 aaKnown RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 LCN6P62502 163 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 ELF3P78545 371 aaPredicted RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 CLEC12AQ5QGZ9 265 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 SP5Q6BEB4 398 aaPredicted RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 ZFP1Q6P2D0 407 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 LRFN4Q6PJG9 635 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 SMARCD3Q6STE5 483 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 ZNF620Q6ZNG0 422 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 Q6ZT83 130 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 RASSF6Q6ZTQ3 369 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 BEND4Q6ZU67 534 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 FAM122BQ7Z309 247 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 STK32CQ86UX6 486 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 C20orf196Q8IYI0 205 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 OR6X1Q8NH79 312 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 ZNF519Q8TB69 540 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 FANK1Q8TC84 345 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 HTRA1Q92743 480 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 TMEM54Q969K7 222 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 BDH2Q9BUT1 245 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 POLDIP3Q9BY77 421 aaKnown RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 KRCC1Q9NPI7 259 aaPredicted RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 NRIP3Q9NQ35 241 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 UPB1Q9UBR1 384 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 PLEKHB1Q9UF11 243 aaPredicted RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 FOXD3Q9UJU5 478 aaPredicted RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 OAZ3Q9UMX2 235 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 RCE1Q9Y256 329 aa13.98□□□□□ -0.17
COPS3-207ENST00000477299 KLF2Q9Y5W3 355 aaPredicted RBP13.98□□□□□ -0.17
COPS3-207ENST00000477299 A0A1W2PR80 420 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 G3V2T6 193 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 SLC43A1O75387 559 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 SEC14L2O76054 403 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 BAG2O95816 211 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 IGHMP01871 453 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 PGA4P0DJD7 388 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 PGA3P0DJD8 388 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 ACADSP16219 412 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 ZNF23P17027 643 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 IGFBP2P18065 325 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 UGT2B10P36537 528 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 FMODQ06828 376 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 ANKDD1AQ495B1 522 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 MESTQ5EB52 335 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 SFRP5Q5T4F7 317 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 FAHD1Q6P587 224 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 PTCHD4Q6ZW05 846 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 ZNF771Q7L3S4 317 aaPredicted RBP13.97□□□□□ -0.17
COPS3-207ENST00000477299 ZNF433Q8N7K0 673 aaPredicted RBP13.97□□□□□ -0.17
COPS3-207ENST00000477299 OR4Q3Q8NH05 313 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 NRBF2Q96F24 287 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 WFIKKN1Q96NZ8 548 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 MRPL13Q9BYD1 178 aaKnown RBP13.97□□□□□ -0.17
COPS3-207ENST00000477299 GPR35Q9HC97 309 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 MALT1Q9UDY8 824 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 CDH10Q9Y6N8 788 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 PTPN13Q12923 2485 aa13.97□□□□□ -0.17
COPS3-207ENST00000477299 TEX13CA0A0J9YWL9 993 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 ARRDC5A6NEK1 342 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 RAD51DO75771 328 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 FCGR1AP12314 374 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 ROR2Q01974 943 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms