RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 RFXANKO14593 260 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 FZD7O75084 574 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 BGLAPP02818 100 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 MYZAPP0CAP1 466 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 NQO1P15559 274 aaKnown RBP10.2□□□□□ -0.78
HDAC6-219ENST00000476625 EPHA3P29320 983 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 CRISP3P54108 245 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 LCN2P80188 198 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 NKPD1Q17RQ9 610 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 DPY19L1Q2PZI1 675 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 H1FNTQ75WM6 255 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-219ENST00000476625 BCL6BQ8N143 479 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-219ENST00000476625 TRIML2Q8N7C3 387 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 SIGLECL1Q8N7X8 197 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 ICA1LQ8NDH6 482 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 BHLHE22Q8NFJ8 381 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-219ENST00000476625 PKD1L1Q8TDX9 2849 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 FOXB1Q99853 325 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 SH3GL3Q99963 347 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 ULBP2Q9BZM5 246 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 MS4A5Q9H3V2 200 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 DCAF16Q9NXF7 216 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 POFUT2Q9Y2G5 429 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 TRRAPQ9Y4A5 3859 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 A0A087WUJ7 227 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 A0A096LPI6 279 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 C11orf98E9PRG8 122 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 PRSS23O95084 383 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 RAB36O95755 333 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 FSHBP01225 129 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 IGHV2-5P01817 119 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 MAKP20794 623 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 ZFP36P26651 326 aaKnown RBP10.19□□□□□ -0.78
HDAC6-219ENST00000476625 EVX1P49640 407 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 VSNL1P62760 191 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 GALK2Q01415 458 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 IFFO1Q0D2I5 559 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 ZP4Q12836 540 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 MELKQ14680 651 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 LARS2Q15031 903 aaKnown RBP10.19□□□□□ -0.78
HDAC6-219ENST00000476625 FAM69AQ5T7M9 428 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 ACSM5Q6NUN0 579 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 UGT2A3Q6UWM9 527 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 C6orf89Q6UWU4 347 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 USP43Q70EL4 1123 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 JAZF1Q86VZ6 243 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 BPIFB2Q8N4F0 458 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 ANKK1Q8NFD2 765 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 OR6N1Q8NGY5 312 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 ZIM3Q96PE6 472 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 TPT1P8Q9HAU6 139 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 WIPI2Q9Y4P8 454 aa10.19□□□□□ -0.78
HDAC6-219ENST00000476625 TRAV36DV7A0A075B6V5 113 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 C17orf100A8MU93 164 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 TPST2O60704 377 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 ANP32DO95626 131 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 KRT75O95678 551 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 KITP10721 976 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 PAX7P23759 505 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 ANXA11P50995 505 aaKnown RBP10.18□□□□□ -0.78
HDAC6-219ENST00000476625 BIDP55957 195 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 TMEM33P57088 247 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 SRSF4Q08170 494 aaKnown RBP10.18□□□□□ -0.78
HDAC6-219ENST00000476625 BST1Q10588 318 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 ALG10BQ5I7T1 473 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 DCAF12L2Q5VW00 463 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 RGS7BPQ6MZT1 257 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-219ENST00000476625 OGFOD2Q6N063 350 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 SLC2A7Q6PXP3 512 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 USP51Q70EK9 711 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 IL17RDQ8NFM7 739 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 NFKBIDQ8NI38 313 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 MGARPQ8TDB4 240 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 DVL3Q92997 716 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-219ENST00000476625 SLC38A4Q969I6 547 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF48Q96MX3 618 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF747Q9BV97 191 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF416Q9BWM5 594 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 SUCNR1Q9BXA5 334 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 RPS6KB2Q9UBS0 482 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 SLC7A8Q9UHI5 535 aa10.18□□□□□ -0.78
HDAC6-219ENST00000476625 IGHV3OR16-10A0A075B7F0 116 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 IGHV1-69-2A0A0G2JMI3 117 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 A0A0G2JMP0 313 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 A0A0G2JPF8 293 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 A0A0X1KG70 313 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 DNAJC9-AS1A6NH13 148 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 HNRNPCL2B2RXH8 293 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 HNRNPCL3B7ZW38 293 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 HNRNPCL1O60812 293 aaKnown RBP10.17□□□□□ -0.78
HDAC6-219ENST00000476625 LCKP06239 509 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 HNRNPCL4P0DMR1 293 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 HKR1P10072 659 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 AHCYP23526 432 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 SEC61A1P61619 476 aaKnown RBP10.17□□□□□ -0.78
HDAC6-219ENST00000476625 STX3Q13277 289 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 PMS2P3Q13401 168 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 SPATA46Q5T0L3 261 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF627Q7L945 461 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 MAVSQ7Z434 540 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms