RNA–Protein interactions for RNA: ENST00000476502.1

TRBV1-201, Transcript of T cell receptor beta variable 1 (pseudogene), humanhuman

BASIC

Gene TRBV1, Length 284 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV1-201ENST00000476502 IGKV6D-21A0A0A0MT36 114 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 A0A1W2PNV4 684 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 MYBPHLA2RUH7 354 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SPECC1L-ADORA2AF8WAN1 911 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 G3V4G9 280 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 ZBTB5O15062 677 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 MSH4O15457 936 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 RNF113AO15541 343 aaKnown RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 LRRTM2O43300 516 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 RNF13O43567 381 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 DFNA5O60443 496 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 DNAJB6O75190 326 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TRIM3O75382 744 aaPredicted RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TSPAN12O95859 305 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 FGF4P08620 206 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 WNT2P09544 360 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 GIG44P09565 113 aaPredicted RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 H2BFMP0C1H6 154 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 PABPC4LP0CB38 370 aaKnown RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 DNAH10OSP0CZ25 163 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 BCKDHAP12694 445 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 ANXA8P13928 327 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CCDC130P13994 396 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 MMP11P24347 488 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 U2AF2P26368 475 aaKnown RBP eCLIP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CASP14P31944 242 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CDH5P33151 784 aaPredicted RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CCR2P41597 374 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SSR1P43307 286 aaKnown RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SYKP43405 635 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TPMTP51580 245 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 ATP1B3P54709 279 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 MFAP2P55001 183 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SEMG2Q02383 582 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 OC90Q02509 493 aaPredicted RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 ZNF33BQ06732 778 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TGM3Q08188 693 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 C1orf61Q13536 156 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 ZIC1Q15915 447 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 DPYSL2Q16555 572 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SLC5A12Q1EHB4 618 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CNPY1Q3B7I2 92 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SFT2D3Q587I9 215 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 NHLRC3Q5JS37 347 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 ZNF506Q5JVG8 444 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CTSL3PQ5NE16 218 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 LIN9Q5TKA1 542 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 ANXA8L1Q5VT79 327 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 REP15Q6BDI9 236 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TWF2Q6IBS0 349 aaKnown RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 EMBQ6PCB8 327 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 Q6ZR54 194 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CEACAM19Q7Z692 300 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 DHDDSQ86SQ9 333 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SLC25A42Q86VD7 318 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TGIF2LXQ8IUE1 241 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 BPIFB2Q8N4F0 458 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 DEFB119Q8N690 84 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 ALLCQ8N6M5 410 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 MFSD9Q8NBP5 474 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 OR6C4Q8NGE1 309 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 OR10A7Q8NGE5 316 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 RFESDQ8TAC1 157 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 RAB3IL1Q8TBN0 382 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 PIBF1Q8WXW3 757 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 C11orf24Q96F05 449 aaPredicted RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SLC38A2Q96QD8 506 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TMEM175Q9BSA9 504 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TUBGCP2Q9BSJ2 902 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 SLC2A8Q9NY64 477 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 RCOR3Q9P2K3 495 aaPredicted RBP2.3□□□□□ -2.04
TRBV1-201ENST00000476502 GALPQ9UBC7 116 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 PISDQ9UG56 409 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 RARRES3Q9UL19 164 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 KIAA1257Q9ULG3 409 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 POLDIP2Q9Y2S7 368 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 TIMM10BQ9Y5J6 103 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CPQQ9Y646 472 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 CABIN1Q9Y6J0 2220 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 NBASA2RRP1 2371 aa2.3□□□□□ -2.04
TRBV1-201ENST00000476502 MTORP42345 2549 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 SPTBN1Q01082 2364 aaKnown RBP2.29□□□□□ -2.04
TRBV1-201ENST00000476502 COL4A2P08572 1712 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 H0YIV9 168 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 H3BMQ9 156 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 BOLA2-SMG1P6H3BVE0 249 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 LSM1O15116 133 aaKnown RBP2.29□□□□□ -2.04
TRBV1-201ENST00000476502 RS1O15537 224 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 ZNF253O75346 499 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 CCNE2O96020 404 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 KRTAP1-4P0C5Y4 121 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 TROVE2P10155 538 aaKnown RBP eCLIP2.29□□□□□ -2.04
TRBV1-201ENST00000476502 SDC1P18827 310 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 POLR2EP19388 210 aaKnown RBP2.29□□□□□ -2.04
TRBV1-201ENST00000476502 IMPDH1P20839 514 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 GCAP28676 217 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 GNA11P29992 359 aa2.29□□□□□ -2.04
TRBV1-201ENST00000476502 SPRP35270 261 aaPredicted RBP2.29□□□□□ -2.04
TRBV1-201ENST00000476502 RPL13AP40429 203 aaKnown RBP2.29□□□□□ -2.04
TRBV1-201ENST00000476502 ARHGDIAP52565 204 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms