RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 CLPTM1LQ96KA5 538 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 ARL5BQ96KC2 179 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 RAB3IPQ96QF0 476 aaPredicted RBP12.05□□□□□ -0.48
FAM3A-218ENST00000475657 OR11A1Q9GZK7 315 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 ZNF350Q9GZX5 532 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 MOV10Q9HCE1 1003 aaKnown RBP12.05□□□□□ -0.48
FAM3A-218ENST00000475657 CTPS2Q9NRF8 586 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 POLE3Q9NRF9 147 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 SLC7A10Q9NS82 523 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 DDX28Q9NUL7 540 aaKnown RBP12.05□□□□□ -0.48
FAM3A-218ENST00000475657 MED29Q9NX70 200 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 CALML5Q9NZT1 146 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 MAGEL2Q9UJ55 1249 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 ANGPT4Q9Y264 503 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 CMYA5Q8N3K9 4069 aa12.05□□□□□ -0.48
FAM3A-218ENST00000475657 PRAMEF27A3QJZ7 478 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 C5orf58C9J3I9 102 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 hCG_2039718K7EN88 272 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 PMS2P2O95744 297 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 BCHEP06276 602 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 IGFBP1P08833 259 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-218ENST00000475657 NR2F1P10589 423 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
FAM3A-218ENST00000475657 NAAAQ02083 359 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 SCARB2Q14108 478 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 GPAT3Q53EU6 434 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 C9orf135Q5VTT2 229 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 AP1ARQ63HQ0 302 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 REEP3Q6NUK4 255 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 ANKRD16Q6P6B7 361 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 LRRC74BQ6ZQY2 392 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 C1QL2Q7Z5L3 287 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 CCDC103Q8IW40 242 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 ZCCHC24Q8N2G6 241 aaKnown RBP12.04□□□□□ -0.48
FAM3A-218ENST00000475657 FAM156AQ8NDB6 213 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 NFKBIDQ8NI38 313 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 BBS10Q8TAM1 723 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 PMM1Q92871 262 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 PIF1Q9H611 641 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 NTN4Q9HB63 628 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 BCL2L10Q9HD36 194 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 ACER3Q9NUN7 267 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 CRNNQ9UBG3 495 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-218ENST00000475657 SLC7A8Q9UHI5 535 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 SLC9A8Q9Y2E8 581 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 WDR45Q9Y484 360 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 SNX13Q9Y5W8 968 aa12.04□□□□□ -0.48
FAM3A-218ENST00000475657 LOC105371242A0A075B767 164 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 TMEM129A0AVI4 362 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 AP3D1O14617 1153 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 AVPP01185 164 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 CHRM4P08173 479 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 GAAP10253 952 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 TCN1P20061 433 aaPredicted RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 NPR2P20594 1047 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 CLK1P49759 484 aaKnown RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 PCBP3P57721 371 aaKnown RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 OR2B6P58173 313 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 H3F3AP84243 136 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 IL1RL1Q01638 556 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 TRIM25Q14258 630 aaKnown RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 MAPK11Q15759 364 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 SYPL1Q16563 259 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 TSPO2Q5TGU0 170 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 VHLLQ6RSH7 139 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 CASP12Q6UXS9 341 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 FAM169BQ8N8A8 192 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 ANKFN1Q8N957 763 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 OIT3Q8WWZ8 545 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 TMEM234Q8WY98 164 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 CNOT9Q92600 299 aaKnown RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 UTP4Q969X6 686 aaKnown RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 CCDC124Q96CT7 223 aaKnown RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 SLC6A7Q99884 636 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 SLC38A1Q9H2H9 487 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 ACTR3BQ9P1U1 418 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 GMPR2Q9P2T1 348 aaKnown RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 HDGFL3Q9Y3E1 203 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 SPIN1Q9Y657 262 aaPredicted RBP12.03□□□□□ -0.48
FAM3A-218ENST00000475657 DSPPQ9NZW4 1301 aa12.03□□□□□ -0.48
FAM3A-218ENST00000475657 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 A0A0G2JPF8 293 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 HNRNPCL2B2RXH8 293 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 HNRNPCL3B7ZW38 293 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 CXCR6O00574 342 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 ARPC2O15144 300 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 GSTA4O15217 222 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 GMNNO75496 209 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 CIB2O75838 187 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 IGLV1-44P01699 117 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 HNRNPCL4P0DMR1 293 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 SAGP10523 405 aaPredicted RBP12.02□□□□□ -0.49
FAM3A-218ENST00000475657 ETS2P15036 469 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 ANPEPP15144 967 aa12.02□□□□□ -0.49
FAM3A-218ENST00000475657 NQO1P15559 274 aaKnown RBP12.02□□□□□ -0.49
FAM3A-218ENST00000475657 GPR6P46095 362 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms